Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AGGF1P5-201ENST00000567900 919 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF31Q96EP0 OR1E3-201ENST00000575608 948 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 MIR3154-201ENST00000577829 84 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 BNIP3P32-201ENST00000600015 554 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 AC012175.1-201ENST00000603755 531 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 MIR6721-201ENST00000617181 87 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 MIR6806-201ENST00000622141 64 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 AL162377.2-201ENST00000624532 337 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF31Q96EP0 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 AP004289.1-201ENST00000436307 2205 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 CAP1P2-201ENST00000417455 1409 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 DDX6P1-205ENST00000441966 1436 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF31Q96EP0 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF31Q96EP0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF31Q96EP0 CDY5P-201ENST00000411487 1580 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 CDY9P-201ENST00000451397 1580 ntBASIC6.39□□□□□ -1.39
RNF31Q96EP0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF31Q96EP0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RNF31Q96EP0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF31Q96EP0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 RNU6-40P-201ENST00000384254 107 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AMZ2P2-201ENST00000406819 1057 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 RNA5SP115-201ENST00000411160 107 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC092570.3-201ENST00000420113 693 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AK3P5-201ENST00000432033 519 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 ELOCP3-201ENST00000439303 348 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 RN7SL170P-201ENST00000487098 295 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 OR9N1P-201ENST00000491296 333 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 RPS10P20-201ENST00000494130 463 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC021146.5-201ENST00000503544 545 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 BOLA3P3-201ENST00000505182 232 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC011853.1-201ENST00000518911 454 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 EEF1B2P2-201ENST00000519625 676 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 OR4A42P-201ENST00000531397 938 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 MTND3P12-201ENST00000559068 328 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC093524.1-201ENST00000564266 1094 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 DIMT1P1-201ENST00000603970 763 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC098935.2-201ENST00000604222 466 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC114878.2-201ENST00000604863 1251 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 OR7M1P-201ENST00000608946 533 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 RN7SL261P-201ENST00000613441 282 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AC018926.1-201ENST00000616335 435 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 AL590410.1-201ENST00000617925 333 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF31Q96EP0 AL122023.1-201ENST00000622847 530 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 CASC19-232ENST00000641480 1244 ntBASIC6.38□□□□□ -1.39
RNF31Q96EP0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
RNF31Q96EP0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms