Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 RPL12P12-201ENST00000424633 501 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AC110602.1-201ENST00000437414 318 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 CFL1P4-201ENST00000451536 498 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 CYP4F27P-201ENST00000514557 494 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 MTCO1P28-201ENST00000574177 1528 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AP005119.1-201ENST00000580956 292 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AC119403.2-201ENST00000590960 598 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AC025262.3-201ENST00000623666 360 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 AL022323.4-201ENST00000623980 13120 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 MIR1910-201ENST00000636955 80 ntBASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ECHDC3Q96DC8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 USP9YP3-201ENST00000434481 1766 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 CCAT2-201ENST00000630920 1752 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC130360.2-201ENST00000533477 1556 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 SNORA11.5-201ENST00000408163 128 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 RN7SKP151-201ENST00000410230 316 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 RN7SKP240-201ENST00000410583 375 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 RPS14P4-201ENST00000415880 418 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 HSPE1P27-201ENST00000430808 296 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC016027.4-201ENST00000450866 277 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 RPL17P2-201ENST00000491913 451 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 RNA5SP340-201ENST00000517132 107 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 RPA2P1-201ENST00000556557 721 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC090826.1-203ENST00000569235 490 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC027334.1-201ENST00000603257 310 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AL137246.2-201ENST00000613439 662 ntBASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ECHDC3Q96DC8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 CASC19-238ENST00000641523 1558 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 QRSL1P1-201ENST00000400977 1540 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 RNA5SP375-201ENST00000362975 119 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 LCN1P2-201ENST00000372030 223 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC004386.1-201ENST00000393214 761 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 RAB5CP1-201ENST00000395972 580 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 RPL35AP3-201ENST00000414680 288 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 ATP5LP2-201ENST00000440646 311 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 RPL7L1P3-201ENST00000455249 689 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC098847.1-201ENST00000473094 348 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC092865.4-201ENST00000477936 615 ntBASIC6.1□□□□□ -1.43
ECHDC3Q96DC8 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms