Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL731534.1-201ENST00000434711 269 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 PPIAP10-201ENST00000438675 458 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 RPL12P31-201ENST00000478433 450 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 RPS7P11-201ENST00000484240 586 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC063977.7-201ENST00000594454 337 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC211486.4-201ENST00000621495 113 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 EIF3EP1-201ENST00000433978 1316 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC217777.1-201ENST00000570034 1471 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AL359091.1-201ENST00000449048 1734 ntBASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLHC1Q8NHS4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 CDY11P-201ENST00000447168 1651 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC079248.1-201ENST00000427568 1546 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC018717.1-201ENST00000457712 1505 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 SNORA64.3-201ENST00000365647 134 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 TRAV35-201ENST00000390462 330 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 VIM2P-201ENST00000402383 1294 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 RPS26P38-201ENST00000414476 348 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 RPEP4-201ENST00000437636 602 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 OR2L9P-201ENST00000444456 913 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC009963.4-201ENST00000448535 339 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC135999.1-201ENST00000478962 479 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC114728.1-201ENST00000488289 483 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 OR6M2P-201ENST00000529831 871 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC124891.1-201ENST00000536322 519 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 GAPDHP41-201ENST00000613707 975 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 AC089999.3-201ENST00000622440 577 ntBASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLHC1Q8NHS4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 RN7SKP77-201ENST00000363261 353 ntBASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.85□□□□□ -1.47
CLHC1Q8NHS4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms