Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC010409.2-201ENST00000505780 478 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC005519.1-201ENST00000554490 601 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AF186192.2-204ENST00000581667 524 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC010503.3-201ENST00000594355 540 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC010487.1-201ENST00000594408 1172 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 LSM1P2-201ENST00000604911 322 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC114477.1-201ENST00000605097 605 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC009283.1-201ENST00000615852 645 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 MAPK10-328ENST00000641553 4009 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 AC005702.3-201ENST00000585345 1447 ntBASIC5.23□□□□□ -1.57
BEST4Q8NFU0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.23□□□□□ -1.57
BEST4Q8NFU0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AL137058.3-201ENST00000624531 3099 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AL137141.1-201ENST00000624622 4836 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 FDPSP5-201ENST00000399474 1057 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC099670.2-201ENST00000435130 321 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AL020997.1-201ENST00000446554 349 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 MORF4-201ENST00000447135 971 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 MTCO1P55-201ENST00000489829 745 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC114940.1-201ENST00000512162 1265 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 RNU6-751P-201ENST00000516382 101 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC244502.2-201ENST00000543361 851 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC012175.1-201ENST00000603755 531 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 RPS4XP21-201ENST00000603814 750 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC073046.2-201ENST00000604756 527 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AL137000.1-201ENST00000610528 1244 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC079776.5-201ENST00000641920 211 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 HSPD1P1-201ENST00000503199 1726 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 AC233968.1-201ENST00000611212 1300 ntBASIC5.22□□□□□ -1.57
BEST4Q8NFU0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BEST4Q8NFU0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BEST4Q8NFU0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BEST4Q8NFU0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BEST4Q8NFU0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
BEST4Q8NFU0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
BEST4Q8NFU0 OR9K1P-202ENST00000641111 3217 ntBASIC5.21□□□□□ -1.58
BEST4Q8NFU0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.21□□□□□ -1.58
BEST4Q8NFU0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BEST4Q8NFU0 AC011933.2-201ENST00000578539 2790 ntBASIC5.21□□□□□ -1.58
BEST4Q8NFU0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms