Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.65□□□□□ -1.35
NUP43Q8NFH3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 TPTE2P2-201ENST00000403471 1466 ntBASIC6.65□□□□□ -1.35
NUP43Q8NFH3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 DDX43P1-201ENST00000510713 1763 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC126474.2-201ENST00000623268 1750 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 MCTS2P-201ENST00000394552 546 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 NHP2P2-201ENST00000396362 460 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 TYMSP1-201ENST00000407851 869 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL590084.1-201ENST00000407885 387 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 RN7SKP254-201ENST00000410685 310 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 VDAC2P3-201ENST00000430995 828 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 MTND1P4-201ENST00000435196 415 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 HMGN1P6-201ENST00000438508 291 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 NECAP1P2-201ENST00000455668 727 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 SNORA81.1-201ENST00000458922 177 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 RN7SL392P-201ENST00000473024 299 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 RPS14P8-201ENST00000478778 369 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 TMEM97P2-201ENST00000517841 403 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC020937.1-201ENST00000519677 1013 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 KCTD9P6-201ENST00000522306 950 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 GLYATL1P4-201ENST00000529326 906 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 RN7SL657P-201ENST00000582431 293 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC093765.1-201ENST00000603758 881 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC067959.1-201ENST00000604334 379 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL163642.2-201ENST00000604722 1019 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL136139.1-201ENST00000605568 222 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC113361.1-201ENST00000606683 543 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AP001596.2-201ENST00000608410 312 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL445423.1-201ENST00000609941 536 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC068944.2-201ENST00000610373 403 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC068234.2-201ENST00000619646 522 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 RPSAP68-201ENST00000625020 438 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 AC092111.1-201ENST00000618256 3358 ntBASIC6.64□□□□□ -1.35
NUP43Q8NFH3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NUP43Q8NFH3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 AC034111.1-201ENST00000562143 3770 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 RN7SKP1-201ENST00000365525 307 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 AC019178.1-201ENST00000392337 440 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 AC090114.1-201ENST00000393266 448 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 RSL24D1P4-201ENST00000400938 484 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 AL356361.1-201ENST00000400943 1459 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 RAP1BP3-201ENST00000407180 549 ntBASIC6.63□□□□□ -1.35
NUP43Q8NFH3 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.63□□□□□ -1.35
NUP43Q8NFH3 GLUD1P9-201ENST00000420997 1173 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms