Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR323B-201ENST00000385269 82 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 RN7SKP29-201ENST00000410957 272 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 AC245060.4-201ENST00000413293 1121 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 CUBNP2-201ENST00000443534 1139 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 ACA64.4-201ENST00000459070 127 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 AL139099.4-201ENST00000614802 114 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 AC103703.1-201ENST00000634783 663 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 OR8G3P-202ENST00000641572 1255 ntBASIC9.29□□□□□ -0.92
VPS8Q8N3P4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
VPS8Q8N3P4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 AL121835.1-201ENST00000404250 354 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 OR2W4P-201ENST00000406496 926 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 AC104843.2-201ENST00000427666 297 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 TUBB4BP6-201ENST00000437576 479 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 SLC25A51P1-201ENST00000468432 871 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 RN7SKP288-201ENST00000516227 268 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 AC090424.1-201ENST00000535243 736 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 AC020978.7-201ENST00000575953 1187 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 RNA5SP440-201ENST00000612665 119 ntBASIC9.28□□□□□ -0.92
VPS8Q8N3P4 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.28□□□□□ -0.92
VPS8Q8N3P4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.27□□□□□ -0.92
VPS8Q8N3P4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
VPS8Q8N3P4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 PARP4P2-201ENST00000446672 3326 ntBASIC9.27□□□□□ -0.93
VPS8Q8N3P4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 RN7SL57P-201ENST00000493687 290 ntBASIC9.27□□□□□ -0.93
VPS8Q8N3P4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC010547.6-201ENST00000571789 193 ntBASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC145423.1-201ENST00000605712 336 ntBASIC9.27□□□□□ -0.93
VPS8Q8N3P4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC016251.2-201ENST00000623393 3089 ntBASIC9.27□□□□□ -0.93
VPS8Q8N3P4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 LINC02035-201ENST00000610128 5476 ntBASIC9.27□□□□□ -0.93
VPS8Q8N3P4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 AC015689.2-201ENST00000528172 1738 ntBASIC9.27□□□□□ -0.93
VPS8Q8N3P4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
VPS8Q8N3P4 UG0898H09-202ENST00000623646 7040 ntBASIC9.26□□□□□ -0.93
VPS8Q8N3P4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 MRPL53P1-201ENST00000414323 319 ntBASIC9.26□□□□□ -0.93
VPS8Q8N3P4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 GAPDHP48-201ENST00000436626 961 ntBASIC9.26□□□□□ -0.93
VPS8Q8N3P4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 GAPDHP71-201ENST00000511530 1003 ntBASIC9.26□□□□□ -0.93
VPS8Q8N3P4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
VPS8Q8N3P4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 AC068769.1-201ENST00000474767 2426 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 MIR375-201ENST00000362103 64 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 SNORA64.1-201ENST00000362600 132 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 SNORA17A-201ENST00000391185 133 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 AP000281.1-201ENST00000444036 316 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms