Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC026898.1-201ENST00000586404 571 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC090953.1-201ENST00000604305 1092 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 NDUFB9P1-201ENST00000604683 510 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC107905.1-201ENST00000616204 426 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 WBP11P1-201ENST00000562560 1931 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AL353743.3-201ENST00000442109 1468 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 SNORD35A-201ENST00000363389 86 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 RN7SKP281-201ENST00000410472 352 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC013403.1-201ENST00000436954 263 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 CYCSP51-201ENST00000443545 318 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 VN1R38P-201ENST00000450265 887 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 SNX18P26-201ENST00000458433 740 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 RPL17P2-201ENST00000491913 451 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AGGF1P3-201ENST00000493675 1213 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC106800.3-201ENST00000511389 308 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC093816.1-201ENST00000515076 913 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 SNORA74.1-201ENST00000516320 180 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 IGKV1D-22-201ENST00000518953 324 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC008055.1-201ENST00000547032 609 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 TPRX1P1-201ENST00000557620 319 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC063977.7-201ENST00000594454 337 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AC048341.3-201ENST00000619323 491 ntBASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP54Q7Z3B4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 SNORD8-201ENST00000363915 110 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AL672167.2-201ENST00000377164 879 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 PSMA6P1-201ENST00000400275 741 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 PRELID1P1-201ENST00000403549 660 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AL157884.1-201ENST00000424561 454 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 OR2L9P-201ENST00000444456 913 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC007383.1-201ENST00000445875 636 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms