Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC008957.3-201ENST00000624112 2242 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AP000641.1-201ENST00000531988 1639 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 RNA5SP149-201ENST00000364952 92 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 BEND6-201ENST00000370745 579 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 RAC1P8-201ENST00000427086 527 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC093155.1-201ENST00000440164 826 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 ST13P20-201ENST00000447996 1065 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC114755.1-201ENST00000453101 868 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC244505.3-201ENST00000454598 187 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC026348.1-201ENST00000462549 1053 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 HSPE1P23-201ENST00000509838 286 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 Y_RNA.701-201ENST00000516812 110 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 OR5AK3P-201ENST00000527486 1297 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 RN7SL785P-201ENST00000578437 253 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 SYPL1P2-201ENST00000582878 727 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC060766.2-201ENST00000588235 334 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 RMST_10.1-201ENST00000616309 154 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC005790.1-201ENST00000619774 450 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 TUBBP10-201ENST00000427668 1301 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 OR8B9P-202ENST00000642028 5216 ntBASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
FOXR1Q6PIV2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 CASC19-243ENST00000641588 1546 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AC091544.5-201ENST00000620192 3815 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AC112243.1-201ENST00000623949 3851 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 OR56B2P-201ENST00000317102 954 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 U3.1-201ENST00000362500 215 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 RNU6-252P-201ENST00000363232 107 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 RNU6-413P-201ENST00000384115 107 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 RNA5SP297-201ENST00000391029 113 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 TAF9BP2-201ENST00000400856 499 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AC003080.1-201ENST00000413552 767 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 CEACAMP8-201ENST00000413902 580 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 Z97055.1-201ENST00000419730 712 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 RPL21P32-201ENST00000419877 477 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AC004448.2-201ENST00000422360 586 ntBASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
FOXR1Q6PIV2 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms