Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
H3F3AP84243 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.49□□□□□ -1.53
H3F3AP84243 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.49□□□□□ -1.53
H3F3AP84243 KATNBL1P2-201ENST00000433311 835 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 AL512593.1-201ENST00000444758 779 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 AC093166.3-201ENST00000448785 303 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 AC068491.1-201ENST00000449539 1241 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.49□□□□□ -1.53
H3F3AP84243 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.49□□□□□ -1.53
H3F3AP84243 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.49□□□□□ -1.53
H3F3AP84243 AC021269.1-201ENST00000526860 705 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 AC090115.2-201ENST00000548060 883 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.49□□□□□ -1.53
H3F3AP84243 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.49□□□□□ -1.53
H3F3AP84243 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.49□□□□□ -1.53
H3F3AP84243 AC020916.2-201ENST00000591242 360 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.49□□□□□ -1.53
H3F3AP84243 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
H3F3AP84243 MIR6806-201ENST00000622141 64 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.49□□□□□ -1.53
H3F3AP84243 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.49□□□□□ -1.53
H3F3AP84243 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
H3F3AP84243 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 AC027575.3-201ENST00000583058 2747 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
H3F3AP84243 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.49□□□□□ -1.53
H3F3AP84243 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.49□□□□□ -1.53
H3F3AP84243 AC024587.1-201ENST00000505925 2157 ntBASIC5.49□□□□□ -1.53
H3F3AP84243 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
H3F3AP84243 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.48□□□□□ -1.53
H3F3AP84243 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.48□□□□□ -1.53
H3F3AP84243 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
H3F3AP84243 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.48□□□□□ -1.53
H3F3AP84243 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 RNU105B-201ENST00000364478 208 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 RN7SKP237-201ENST00000364663 301 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 MIR1275-201ENST00000408770 80 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.48□□□□□ -1.53
H3F3AP84243 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.48□□□□□ -1.53
H3F3AP84243 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 AK3P5-201ENST00000432033 519 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 PSMD10P2-201ENST00000432890 672 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 AL354893.1-201ENST00000433735 348 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.48□□□□□ -1.53
H3F3AP84243 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.48□□□□□ -1.53
H3F3AP84243 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 AC097463.1-201ENST00000447288 481 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 AC009963.4-201ENST00000448535 339 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 OR52I1-201ENST00000450052 1050 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 AC002553.3-201ENST00000453002 341 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 MARK2P8-201ENST00000476069 952 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 AC114728.1-201ENST00000488289 483 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 AC021006.1-201ENST00000489849 553 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.48□□□□□ -1.53
H3F3AP84243 MAST4-IT1-201ENST00000514241 658 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.48□□□□□ -1.53
H3F3AP84243 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 HNRNPCP1-201ENST00000556181 766 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.48□□□□□ -1.53
H3F3AP84243 AC026826.3-201ENST00000561747 158 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 MRPS21P8-201ENST00000569196 235 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 MIR3154-201ENST00000577829 84 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.48□□□□□ -1.53
H3F3AP84243 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.48□□□□□ -1.53
H3F3AP84243 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 AC027334.1-201ENST00000603257 310 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 RN7SL261P-201ENST00000613441 282 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 AP001157.1-201ENST00000550837 2339 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H3F3AP84243 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
H3F3AP84243 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 AL121839.2-201ENST00000565058 6943 ntBASIC5.48□□□□□ -1.53
H3F3AP84243 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H3F3AP84243 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.47□□□□□ -1.53
H3F3AP84243 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.47□□□□□ -1.53
H3F3AP84243 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
H3F3AP84243 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
H3F3AP84243 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.47□□□□□ -1.53
H3F3AP84243 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.47□□□□□ -1.53
H3F3AP84243 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms