Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CBX1P83916 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CBX1P83916 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CBX1P83916 CASC19-248ENST00000641674 1356 ntBASIC6.19□□□□□ -1.42
CBX1P83916 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.19□□□□□ -1.42
CBX1P83916 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CBX1P83916 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CBX1P83916 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.19□□□□□ -1.42
CBX1P83916 GYG1P2-201ENST00000426437 1006 ntBASIC6.19□□□□□ -1.42
CBX1P83916 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.19□□□□□ -1.42
CBX1P83916 ACA64.4-201ENST00000459070 127 ntBASIC6.19□□□□□ -1.42
CBX1P83916 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.19□□□□□ -1.42
CBX1P83916 RN7SL213P-201ENST00000463482 317 ntBASIC6.19□□□□□ -1.42
CBX1P83916 AC099340.1-201ENST00000475247 599 ntBASIC6.19□□□□□ -1.42
CBX1P83916 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.19□□□□□ -1.42
CBX1P83916 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.19□□□□□ -1.42
CBX1P83916 NACAP6-201ENST00000509572 622 ntBASIC6.19□□□□□ -1.42
CBX1P83916 AP003084.1-201ENST00000524828 742 ntBASIC6.19□□□□□ -1.42
CBX1P83916 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.19□□□□□ -1.42
CBX1P83916 AC105036.1-201ENST00000566222 271 ntBASIC6.19□□□□□ -1.42
CBX1P83916 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.19□□□□□ -1.42
CBX1P83916 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CBX1P83916 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.19□□□□□ -1.42
CBX1P83916 uc_338.33-201ENST00000614988 170 ntBASIC6.19□□□□□ -1.42
CBX1P83916 AC087894.3-201ENST00000623682 349 ntBASIC6.19□□□□□ -1.42
CBX1P83916 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.19□□□□□ -1.42
CBX1P83916 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
CBX1P83916 AP005432.1-201ENST00000580891 3485 ntBASIC6.19□□□□□ -1.42
CBX1P83916 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.19□□□□□ -1.42
CBX1P83916 AC112198.2-201ENST00000426589 6996 ntBASIC6.19□□□□□ -1.42
CBX1P83916 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 MTCO1P7-201ENST00000419523 1542 ntBASIC6.19□□□□□ -1.42
CBX1P83916 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.19□□□□□ -1.42
CBX1P83916 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CBX1P83916 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CBX1P83916 AL031595.2-201ENST00000624215 19071 ntBASIC6.19□□□□□ -1.42
CBX1P83916 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CBX1P83916 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.18□□□□□ -1.42
CBX1P83916 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.18□□□□□ -1.42
CBX1P83916 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CBX1P83916 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.18□□□□□ -1.42
CBX1P83916 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.18□□□□□ -1.42
CBX1P83916 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CBX1P83916 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CBX1P83916 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 RN7SKP268-201ENST00000411107 316 ntBASIC6.18□□□□□ -1.42
CBX1P83916 PPIL1P1-201ENST00000423936 499 ntBASIC6.18□□□□□ -1.42
CBX1P83916 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.18□□□□□ -1.42
CBX1P83916 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.18□□□□□ -1.42
CBX1P83916 CRIP1P1-201ENST00000427567 185 ntBASIC6.18□□□□□ -1.42
CBX1P83916 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC6.18□□□□□ -1.42
CBX1P83916 RANP2-201ENST00000456833 229 ntBASIC6.18□□□□□ -1.42
CBX1P83916 AC117383.2-201ENST00000514722 322 ntBASIC6.18□□□□□ -1.42
CBX1P83916 OR8A2P-201ENST00000528631 952 ntBASIC6.18□□□□□ -1.42
CBX1P83916 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CBX1P83916 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.18□□□□□ -1.42
CBX1P83916 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.18□□□□□ -1.42
CBX1P83916 AC106782.7-201ENST00000624024 418 ntBASIC6.18□□□□□ -1.42
CBX1P83916 AC021766.1-201ENST00000624404 741 ntBASIC6.18□□□□□ -1.42
CBX1P83916 AC133555.5-201ENST00000624430 418 ntBASIC6.18□□□□□ -1.42
CBX1P83916 AC073263.3-201ENST00000624449 858 ntBASIC6.18□□□□□ -1.42
CBX1P83916 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.18□□□□□ -1.42
CBX1P83916 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.18□□□□□ -1.42
CBX1P83916 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.18□□□□□ -1.42
CBX1P83916 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CBX1P83916 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CBX1P83916 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.18□□□□□ -1.42
CBX1P83916 AL133243.2-201ENST00000610331 1621 ntBASIC6.17□□□□□ -1.42
CBX1P83916 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CBX1P83916 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CBX1P83916 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.17□□□□□ -1.42
CBX1P83916 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CBX1P83916 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CBX1P83916 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CBX1P83916 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CBX1P83916 RNU4-81P-201ENST00000363561 144 ntBASIC6.17□□□□□ -1.42
CBX1P83916 AC090114.1-201ENST00000393266 448 ntBASIC6.17□□□□□ -1.42
CBX1P83916 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.17□□□□□ -1.42
CBX1P83916 RPSAP59-201ENST00000421048 890 ntBASIC6.17□□□□□ -1.42
CBX1P83916 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.17□□□□□ -1.42
CBX1P83916 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.17□□□□□ -1.42
CBX1P83916 DBIL5P2-201ENST00000443827 253 ntBASIC6.17□□□□□ -1.42
CBX1P83916 OR52I1-201ENST00000450052 1050 ntBASIC6.17□□□□□ -1.42
CBX1P83916 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms