Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 GUCY1B2-204ENST00000531898 1979 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CCNA1P78396 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CCNA1P78396 AC027279.1-201ENST00000568885 4284 ntBASIC7.04□□□□□ -1.28
CCNA1P78396 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.04□□□□□ -1.28
CCNA1P78396 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.04□□□□□ -1.28
CCNA1P78396 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
CCNA1P78396 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 AC127070.3-201ENST00000503695 3263 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 RNU1-150P-201ENST00000362491 162 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 RNU1-24P-201ENST00000364285 165 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 U3.25-201ENST00000391209 220 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 UBE2V1P14-201ENST00000415815 558 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.03□□□□□ -1.28
CCNA1P78396 BX119321.1-201ENST00000428912 797 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 GAPDHP48-201ENST00000436626 961 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 ZNF619P1-201ENST00000446539 752 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.03□□□□□ -1.28
CCNA1P78396 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.03□□□□□ -1.28
CCNA1P78396 YWHAEP1-201ENST00000453697 763 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.03□□□□□ -1.28
CCNA1P78396 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.03□□□□□ -1.28
CCNA1P78396 AC233702.7-202ENST00000582941 211 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.03□□□□□ -1.28
CCNA1P78396 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.03□□□□□ -1.28
CCNA1P78396 OR7A11P-201ENST00000597719 953 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 RNA5SP440-201ENST00000612665 119 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.03□□□□□ -1.28
CCNA1P78396 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.03□□□□□ -1.28
CCNA1P78396 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 OR8G3P-202ENST00000641572 1255 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 AC087269.2-201ENST00000641764 975 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.03□□□□□ -1.28
CCNA1P78396 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 NEPNP-201ENST00000404786 1371 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CCNA1P78396 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 AC027088.4-201ENST00000611559 1947 ntBASIC7.03□□□□□ -1.28
CCNA1P78396 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.03□□□□□ -1.28
CCNA1P78396 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
CCNA1P78396 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.03□□□□□ -1.28
CCNA1P78396 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CCNA1P78396 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CCNA1P78396 RAD17P2-201ENST00000451754 1977 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC110597.1-201ENST00000562669 3176 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 AC139426.3-201ENST00000605648 2059 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
CCNA1P78396 CR788268.1-201ENST00000603931 1809 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 FAM32BP-201ENST00000344033 333 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCNA1P78396 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCNA1P78396 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 MIR640-201ENST00000385086 96 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CCNA1P78396 AL096711.1-201ENST00000404780 554 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.02□□□□□ -1.29
CCNA1P78396 AL096829.1-201ENST00000413677 457 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.02□□□□□ -1.29
CCNA1P78396 AL513325.1-201ENST00000417716 1034 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 BRWD1P3-201ENST00000428816 390 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.02□□□□□ -1.29
CCNA1P78396 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.02□□□□□ -1.29
CCNA1P78396 AC092824.1-201ENST00000483524 576 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC124945.1-201ENST00000485133 188 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 NPM1P27-201ENST00000502784 830 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC027308.1-201ENST00000517993 110 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.02□□□□□ -1.29
CCNA1P78396 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.02□□□□□ -1.29
CCNA1P78396 PCNAP4-201ENST00000532690 730 ntBASIC7.02□□□□□ -1.29
CCNA1P78396 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms