Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM4P67936 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM4P67936 SNORA7A-201ENST00000384765 139 ntBASIC6.73□□□□□ -1.33
TPM4P67936 RPL21P50-201ENST00000417698 477 ntBASIC6.73□□□□□ -1.33
TPM4P67936 RPS7P8-201ENST00000418311 581 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM4P67936 BX119904.3-201ENST00000428194 957 ntBASIC6.73□□□□□ -1.33
TPM4P67936 KATNBL1P2-201ENST00000433311 835 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM4P67936 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TPM4P67936 RPS10P14-201ENST00000440748 502 ntBASIC6.73□□□□□ -1.33
TPM4P67936 BMS1P11-201ENST00000442351 885 ntBASIC6.73□□□□□ -1.33
TPM4P67936 RSU1P1-201ENST00000453416 441 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.73□□□□□ -1.33
TPM4P67936 BMS1P9-201ENST00000457640 885 ntBASIC6.73□□□□□ -1.33
TPM4P67936 RN7SL350P-201ENST00000492591 299 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC008868.1-201ENST00000509786 737 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC111000.6-201ENST00000514471 709 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM4P67936 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM4P67936 AC008055.1-201ENST00000547032 609 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.73□□□□□ -1.33
TPM4P67936 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM4P67936 AL163952.1-202ENST00000569625 600 ntBASIC6.73□□□□□ -1.33
TPM4P67936 PPIAP14-201ENST00000577627 496 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC006115.2-201ENST00000596823 202 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC125494.2-201ENST00000602431 657 ntBASIC6.73□□□□□ -1.33
TPM4P67936 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM4P67936 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.73□□□□□ -1.33
TPM4P67936 MIR6726-201ENST00000613751 61 ntBASIC6.73□□□□□ -1.33
TPM4P67936 SNX18P12-201ENST00000624821 759 ntBASIC6.73□□□□□ -1.33
TPM4P67936 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
TPM4P67936 AC079776.5-201ENST00000641920 211 ntBASIC6.73□□□□□ -1.33
TPM4P67936 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.73□□□□□ -1.33
TPM4P67936 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TPM4P67936 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.73□□□□□ -1.33
TPM4P67936 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 PPBPP2-201ENST00000513150 1362 ntBASIC6.72□□□□□ -1.33
TPM4P67936 AP000473.2-201ENST00000602659 1537 ntBASIC6.72□□□□□ -1.33
TPM4P67936 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
TPM4P67936 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.72□□□□□ -1.33
TPM4P67936 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 RNA5SP155-201ENST00000411154 129 ntBASIC6.72□□□□□ -1.33
TPM4P67936 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM4P67936 AC002127.1-201ENST00000421305 225 ntBASIC6.72□□□□□ -1.33
TPM4P67936 GPN3P1-201ENST00000423883 535 ntBASIC6.72□□□□□ -1.33
TPM4P67936 AC112492.2-201ENST00000432774 1030 ntBASIC6.72□□□□□ -1.33
TPM4P67936 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM4P67936 RPL12P31-201ENST00000478433 450 ntBASIC6.72□□□□□ -1.33
TPM4P67936 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.72□□□□□ -1.33
TPM4P67936 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM4P67936 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM4P67936 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.72□□□□□ -1.33
TPM4P67936 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 OR4C49P-201ENST00000563891 900 ntBASIC6.72□□□□□ -1.33
TPM4P67936 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.72□□□□□ -1.33
TPM4P67936 AC002069.2-201ENST00000603580 883 ntBASIC6.72□□□□□ -1.33
TPM4P67936 FXYD6P1-201ENST00000604857 285 ntBASIC6.72□□□□□ -1.33
TPM4P67936 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
TPM4P67936 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.72□□□□□ -1.33
TPM4P67936 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.72□□□□□ -1.33
TPM4P67936 AC138907.8-201ENST00000623981 2256 ntBASIC6.72□□□□□ -1.33
TPM4P67936 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM4P67936 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM4P67936 AC063923.1-201ENST00000478982 1619 ntBASIC6.72□□□□□ -1.33
TPM4P67936 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.72□□□□□ -1.33
TPM4P67936 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM4P67936 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.71□□□□□ -1.33
TPM4P67936 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.71□□□□□ -1.33
TPM4P67936 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
TPM4P67936 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.71□□□□□ -1.33
TPM4P67936 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TPM4P67936 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TPM4P67936 AC022325.1-201ENST00000502748 2199 ntBASIC6.71□□□□□ -1.33
TPM4P67936 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.71□□□□□ -1.34
TPM4P67936 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM4P67936 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
TPM4P67936 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
TPM4P67936 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TPM4P67936 RNA5SP302-201ENST00000364896 100 ntBASIC6.71□□□□□ -1.34
TPM4P67936 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.71□□□□□ -1.34
TPM4P67936 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TPM4P67936 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TPM4P67936 PEX12P1-201ENST00000400284 1048 ntBASIC6.71□□□□□ -1.34
TPM4P67936 RN7SKP144-201ENST00000411108 279 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AL139135.1-201ENST00000412675 209 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM4P67936 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM4P67936 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM4P67936 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.71□□□□□ -1.34
TPM4P67936 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.71□□□□□ -1.34
TPM4P67936 OR3D1P-201ENST00000438288 955 ntBASIC6.71□□□□□ -1.34
TPM4P67936 NPM1P23-201ENST00000440193 849 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AC073072.2-201ENST00000447425 348 ntBASIC6.71□□□□□ -1.34
TPM4P67936 AL133480.2-201ENST00000456723 487 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms