Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 AL031846.1-201ENST00000560933 314 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 MIR5708-201ENST00000579723 85 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC090616.2-202ENST00000584248 222 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 MIR3159-201ENST00000584572 74 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC106791.2-201ENST00000604680 391 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 SNORD91A-202ENST00000609620 191 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC107075.1-201ENST00000613695 314 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC122133.1-201ENST00000613964 233 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC105227.2-201ENST00000615075 605 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC090246.1-201ENST00000616499 426 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 VN1R7P-201ENST00000619242 903 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AL121985.3-201ENST00000620690 523 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 AL139254.2-202ENST00000641937 1156 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 PSG10P-201ENST00000501199 1500 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC092646.2-201ENST00000431242 2095 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 AC000367.1-201ENST00000452711 1766 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GFRA1P56159 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
GFRA1P56159 Y_RNA.77-201ENST00000362962 107 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 RNU6-157P-201ENST00000383957 107 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 NPM1P38-201ENST00000403835 865 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AL021407.1-201ENST00000404531 386 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 MICG-208ENST00000416822 132 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AL593851.1-201ENST00000426171 157 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 OR52S1P-201ENST00000427016 937 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.49□□□□□ -1.37
GFRA1P56159 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 AL354983.1-201ENST00000434580 906 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 RPS19P6-201ENST00000441327 433 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.49□□□□□ -1.37
GFRA1P56159 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.49□□□□□ -1.37
GFRA1P56159 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.49□□□□□ -1.37
GFRA1P56159 RPSAP7-201ENST00000456871 885 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 RPLP0P1-201ENST00000457002 361 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 PSAT1P4-201ENST00000466500 526 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.49□□□□□ -1.37
GFRA1P56159 AC025271.1-201ENST00000485045 429 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 RPL21P42-201ENST00000488408 464 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 RPS26P24-201ENST00000497656 331 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC105391.1-201ENST00000503155 1045 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC107952.1-201ENST00000524200 376 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.49□□□□□ -1.37
GFRA1P56159 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.49□□□□□ -1.37
GFRA1P56159 AP001646.2-201ENST00000528645 1156 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.49□□□□□ -1.37
GFRA1P56159 DUXAP1-201ENST00000556632 463 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 AC013283.1-201ENST00000557282 492 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GFRA1P56159 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.49□□□□□ -1.37
GFRA1P56159 AC027104.1-201ENST00000563702 681 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC007599.1-201ENST00000568688 1174 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 RN7SL42P-201ENST00000579786 294 ntBASIC6.49□□□□□ -1.37
GFRA1P56159 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms