Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.49□□□□□ -1.37
LHX1P48742 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX1P48742 LINC00556-201ENST00000569603 412 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AC020916.2-201ENST00000591242 360 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AC022400.9-201ENST00000623633 273 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AC005034.3-201ENST00000604845 1747 ntBASIC6.49□□□□□ -1.37
LHX1P48742 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LHX1P48742 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.49□□□□□ -1.37
LHX1P48742 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.49□□□□□ -1.37
LHX1P48742 AC112243.1-201ENST00000623949 3851 ntBASIC6.49□□□□□ -1.37
LHX1P48742 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 AP000866.6-201ENST00000638898 3579 ntBASIC6.49□□□□□ -1.37
LHX1P48742 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX1P48742 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
LHX1P48742 SYT14P1-202ENST00000600441 1448 ntBASIC6.49□□□□□ -1.37
LHX1P48742 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LHX1P48742 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.49□□□□□ -1.37
LHX1P48742 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 Z93929.1-201ENST00000418200 1475 ntBASIC6.48□□□□□ -1.37
LHX1P48742 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LHX1P48742 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LHX1P48742 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 AC007562.1-201ENST00000421819 517 ntBASIC6.48□□□□□ -1.37
LHX1P48742 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.48□□□□□ -1.37
LHX1P48742 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.48□□□□□ -1.37
LHX1P48742 DNAJA1P5-201ENST00000440278 943 ntBASIC6.48□□□□□ -1.37
LHX1P48742 EIF5AP4-201ENST00000441206 465 ntBASIC6.48□□□□□ -1.37
LHX1P48742 AC079922.1-201ENST00000443291 359 ntBASIC6.48□□□□□ -1.37
LHX1P48742 AL512593.1-201ENST00000444758 779 ntBASIC6.48□□□□□ -1.37
LHX1P48742 AC023274.2-201ENST00000445264 521 ntBASIC6.48□□□□□ -1.37
LHX1P48742 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.48□□□□□ -1.37
LHX1P48742 AC016027.4-201ENST00000450866 277 ntBASIC6.48□□□□□ -1.37
LHX1P48742 RPL7L1P3-201ENST00000455249 689 ntBASIC6.48□□□□□ -1.37
LHX1P48742 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.48□□□□□ -1.37
LHX1P48742 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.48□□□□□ -1.37
LHX1P48742 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 RNA5SP340-201ENST00000517132 107 ntBASIC6.48□□□□□ -1.37
LHX1P48742 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.48□□□□□ -1.37
LHX1P48742 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 AP005119.1-201ENST00000580956 292 ntBASIC6.48□□□□□ -1.37
LHX1P48742 RNU4ATAC-201ENST00000580972 127 ntBASIC6.48□□□□□ -1.37
LHX1P48742 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.48□□□□□ -1.37
LHX1P48742 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 AC067773.1-201ENST00000603284 1094 ntBASIC6.48□□□□□ -1.37
LHX1P48742 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 AC108865.2-201ENST00000606881 432 ntBASIC6.48□□□□□ -1.37
LHX1P48742 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX1P48742 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX1P48742 GNL2P1-201ENST00000451274 2190 ntBASIC6.48□□□□□ -1.37
LHX1P48742 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX1P48742 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX1P48742 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX1P48742 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LHX1P48742 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LHX1P48742 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
LHX1P48742 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.47□□□□□ -1.37
LHX1P48742 RPS21P8-201ENST00000413365 247 ntBASIC6.47□□□□□ -1.37
LHX1P48742 HMGA1P8-201ENST00000414130 321 ntBASIC6.47□□□□□ -1.37
LHX1P48742 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.47□□□□□ -1.37
LHX1P48742 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.47□□□□□ -1.37
LHX1P48742 AL022319.1-201ENST00000458183 1167 ntBASIC6.47□□□□□ -1.37
LHX1P48742 RN7SL352P-201ENST00000466002 277 ntBASIC6.47□□□□□ -1.37
LHX1P48742 AC083795.1-201ENST00000491760 320 ntBASIC6.47□□□□□ -1.37
LHX1P48742 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.47□□□□□ -1.37
LHX1P48742 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.47□□□□□ -1.37
LHX1P48742 TRIM77BP-201ENST00000524985 1119 ntBASIC6.47□□□□□ -1.37
LHX1P48742 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX1P48742 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms