Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM23P36406 AL157831.2-201ENST00000564681 3095 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM23P36406 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRIM23P36406 UBE2V1P14-201ENST00000415815 558 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM23P36406 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM23P36406 AC092967.1-201ENST00000449016 481 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM23P36406 SNRPCP3-201ENST00000474888 476 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM23P36406 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM23P36406 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM23P36406 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM23P36406 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM23P36406 AC090115.2-201ENST00000548060 883 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM23P36406 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM23P36406 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 AC092266.1-201ENST00000610958 165 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 MIR6778-201ENST00000617912 73 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM23P36406 AC025262.3-201ENST00000623666 360 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM23P36406 AC006213.6-201ENST00000623722 4179 ntBASIC6.16□□□□□ -1.42
TRIM23P36406 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM23P36406 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM23P36406 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM23P36406 AP004289.1-201ENST00000436307 2205 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM23P36406 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM23P36406 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 AC012078.1-201ENST00000405035 1646 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM23P36406 OR11H13P-201ENST00000359695 979 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 AL445238.1-204ENST00000400311 463 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 SNORA77.2-201ENST00000408571 112 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM23P36406 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM23P36406 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM23P36406 AC002069.1-201ENST00000429649 1159 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM23P36406 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM23P36406 OR3D1P-201ENST00000438288 955 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM23P36406 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 PPIAP27-201ENST00000453800 265 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM23P36406 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM23P36406 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM23P36406 RNU6-964P-201ENST00000516524 69 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM23P36406 OR7E158P-201ENST00000524483 910 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM23P36406 MIR4301-201ENST00000577203 66 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 AC008507.3-201ENST00000585753 472 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 RN7SL261P-201ENST00000613441 282 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM23P36406 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM23P36406 AC011416.1-201ENST00000514947 1732 ntBASIC6.15□□□□□ -1.42
TRIM23P36406 AC022034.1-201ENST00000512867 2156 ntBASIC6.15□□□□□ -1.43
TRIM23P36406 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM23P36406 EIF3EP1-201ENST00000433978 1316 ntBASIC6.15□□□□□ -1.43
TRIM23P36406 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.15□□□□□ -1.43
TRIM23P36406 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms