Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
SHC1P29353 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHC1P29353 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 AC022164.1-201ENST00000568767 2673 ntBASIC5.62□□□□□ -1.51
SHC1P29353 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHC1P29353 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SHC1P29353 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SHC1P29353 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
SHC1P29353 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.61□□□□□ -1.51
SHC1P29353 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.61□□□□□ -1.51
SHC1P29353 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHC1P29353 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
SHC1P29353 SNORA43.1-201ENST00000364863 140 ntBASIC5.61□□□□□ -1.51
SHC1P29353 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 RNU11-6P-201ENST00000391127 133 ntBASIC5.61□□□□□ -1.51
SHC1P29353 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHC1P29353 RNU6-233P-201ENST00000410845 141 ntBASIC5.61□□□□□ -1.51
SHC1P29353 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.61□□□□□ -1.51
SHC1P29353 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.61□□□□□ -1.51
SHC1P29353 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.61□□□□□ -1.51
SHC1P29353 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 ARL4AP4-201ENST00000434170 518 ntBASIC5.61□□□□□ -1.51
SHC1P29353 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 AC016908.1-201ENST00000442571 1219 ntBASIC5.61□□□□□ -1.51
SHC1P29353 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.61□□□□□ -1.51
SHC1P29353 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 AC002075.1-201ENST00000457396 676 ntBASIC5.61□□□□□ -1.51
SHC1P29353 snoU13.29-201ENST00000459370 104 ntBASIC5.61□□□□□ -1.51
SHC1P29353 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.61□□□□□ -1.51
SHC1P29353 RN7SL741P-201ENST00000482473 289 ntBASIC5.61□□□□□ -1.51
SHC1P29353 NATP-201ENST00000523491 878 ntBASIC5.61□□□□□ -1.51
SHC1P29353 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.61□□□□□ -1.51
SHC1P29353 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.61□□□□□ -1.51
SHC1P29353 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.61□□□□□ -1.51
SHC1P29353 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHC1P29353 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.61□□□□□ -1.51
SHC1P29353 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.61□□□□□ -1.51
SHC1P29353 MIR3154-201ENST00000577829 84 ntBASIC5.61□□□□□ -1.51
SHC1P29353 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SHC1P29353 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.61□□□□□ -1.51
SHC1P29353 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.61□□□□□ -1.51
SHC1P29353 SMIM12P1-201ENST00000603004 274 ntBASIC5.61□□□□□ -1.51
SHC1P29353 SNORA74.4-201ENST00000607595 199 ntBASIC5.61□□□□□ -1.51
SHC1P29353 AL121768.1-201ENST00000613917 2544 ntBASIC5.61□□□□□ -1.51
SHC1P29353 MIR6806-201ENST00000622141 64 ntBASIC5.61□□□□□ -1.51
SHC1P29353 AL109924.4-201ENST00000623089 670 ntBASIC5.61□□□□□ -1.51
SHC1P29353 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.61□□□□□ -1.51
SHC1P29353 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHC1P29353 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHC1P29353 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.61□□□□□ -1.51
SHC1P29353 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHC1P29353 AC092692.1-201ENST00000623625 2595 ntBASIC5.61□□□□□ -1.51
SHC1P29353 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.6□□□□□ -1.51
SHC1P29353 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHC1P29353 HDAC1P2-201ENST00000453661 1398 ntBASIC5.6□□□□□ -1.51
SHC1P29353 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHC1P29353 RBBP4P5-201ENST00000398583 1266 ntBASIC5.6□□□□□ -1.51
SHC1P29353 GCNT1P4-201ENST00000404096 329 ntBASIC5.6□□□□□ -1.51
SHC1P29353 AL139805.1-201ENST00000407837 289 ntBASIC5.6□□□□□ -1.51
SHC1P29353 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.6□□□□□ -1.51
SHC1P29353 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 AC092651.1-201ENST00000426110 312 ntBASIC5.6□□□□□ -1.51
SHC1P29353 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 RPSAP65-201ENST00000429660 595 ntBASIC5.6□□□□□ -1.51
SHC1P29353 PSMD10P2-201ENST00000432890 672 ntBASIC5.6□□□□□ -1.51
SHC1P29353 PPIAP10-201ENST00000438675 458 ntBASIC5.6□□□□□ -1.51
SHC1P29353 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 AC073594.1-201ENST00000462065 364 ntBASIC5.6□□□□□ -1.51
SHC1P29353 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.6□□□□□ -1.51
SHC1P29353 AC021006.1-201ENST00000489849 553 ntBASIC5.6□□□□□ -1.51
SHC1P29353 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.6□□□□□ -1.51
SHC1P29353 RNA5SP473-201ENST00000516402 125 ntBASIC5.6□□□□□ -1.51
SHC1P29353 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.6□□□□□ -1.51
SHC1P29353 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHC1P29353 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms