Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NFKB1P19838 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.6□□□□□ -1.19
NFKB1P19838 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
NFKB1P19838 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.6□□□□□ -1.19
NFKB1P19838 TPRKBP2-201ENST00000565969 475 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 AC012435.1-202ENST00000568772 240 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 AC136944.5-201ENST00000573021 151 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.6□□□□□ -1.19
NFKB1P19838 MIR5192-201ENST00000579892 92 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 AP005262.1-201ENST00000582646 997 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 WDR45BP1-201ENST00000583470 1029 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.6□□□□□ -1.19
NFKB1P19838 AP004247.4-201ENST00000608484 942 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 AC025594.3-201ENST00000613068 790 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.6□□□□□ -1.19
NFKB1P19838 SNORA43.5-201ENST00000631270 138 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
NFKB1P19838 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NFKB1P19838 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NFKB1P19838 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NFKB1P19838 AF131215.2-201ENST00000531549 1710 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.6□□□□□ -1.19
NFKB1P19838 KYNUP1-201ENST00000466683 1406 ntBASIC7.6□□□□□ -1.19
NFKB1P19838 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
NFKB1P19838 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
NFKB1P19838 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.6□□□□□ -1.19
NFKB1P19838 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 EIF3EP1-201ENST00000433978 1316 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 AL133320.1-201ENST00000621423 2352 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 RNY4P24-201ENST00000362735 96 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 SSX6-201ENST00000376932 562 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 RNU6-1011P-201ENST00000384668 107 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 SNORD65C-201ENST00000390962 71 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 RPL7P8-201ENST00000411964 730 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC098592.2-201ENST00000413158 265 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AL139421.1-201ENST00000423010 169 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 RAB9AP5-201ENST00000437794 597 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 RAB9AP2-201ENST00000443911 597 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 EEF1E1P1-201ENST00000446998 430 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC114755.5-201ENST00000447760 831 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC234771.3-201ENST00000454984 622 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC037198.2-201ENST00000478845 733 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 RN7SL549P-201ENST00000478997 282 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC104971.1-201ENST00000495117 578 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
NFKB1P19838 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC074344.1-201ENST00000512823 224 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 MTCYBP44-201ENST00000514835 823 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 IGKV2-29-201ENST00000521304 372 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC7.59□□□□□ -1.19
NFKB1P19838 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 RN7SL25P-201ENST00000583862 260 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC010327.2-201ENST00000587647 488 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.59□□□□□ -1.19
NFKB1P19838 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.59□□□□□ -1.19
NFKB1P19838 AL512430.4-201ENST00000603085 613 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC083899.3-201ENST00000603413 594 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC119501.1-201ENST00000603646 475 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC005034.5-201ENST00000604219 466 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.59□□□□□ -1.19
NFKB1P19838 AC092954.2-201ENST00000609103 430 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AL022238.3-201ENST00000609279 443 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC097505.1-201ENST00000610199 565 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AL592148.2-201ENST00000612210 372 ntBASIC7.59□□□□□ -1.19
NFKB1P19838 AC135050.6-202ENST00000613584 392 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms