Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF1P18846 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ATF1P18846 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ATF1P18846 AC003045.1-201ENST00000398779 713 ntBASIC5.3□□□□□ -1.56
ATF1P18846 VIM2P-201ENST00000402383 1294 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AC245096.1-201ENST00000413104 546 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.3□□□□□ -1.56
ATF1P18846 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.3□□□□□ -1.56
ATF1P18846 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF1P18846 BX276092.6-201ENST00000430476 250 ntBASIC5.3□□□□□ -1.56
ATF1P18846 POU5F1P5-201ENST00000445059 658 ntBASIC5.3□□□□□ -1.56
ATF1P18846 BX276092.8-201ENST00000455722 250 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AC063955.1-201ENST00000462872 685 ntBASIC5.3□□□□□ -1.56
ATF1P18846 Y_RNA.710-201ENST00000516975 110 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF1P18846 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF1P18846 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF1P18846 AC060780.2-201ENST00000589047 198 ntBASIC5.3□□□□□ -1.56
ATF1P18846 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AL591222.2-201ENST00000604443 754 ntBASIC5.3□□□□□ -1.56
ATF1P18846 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AL591167.1-201ENST00000607321 456 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AC068726.1-201ENST00000610993 341 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF1P18846 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
ATF1P18846 RNA5SP439-201ENST00000617595 124 ntBASIC5.3□□□□□ -1.56
ATF1P18846 AC091059.2-201ENST00000623355 614 ntBASIC5.3□□□□□ -1.56
ATF1P18846 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF1P18846 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF1P18846 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF1P18846 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF1P18846 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF1P18846 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ATF1P18846 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ATF1P18846 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 AC024587.1-201ENST00000505925 2157 ntBASIC5.29□□□□□ -1.56
ATF1P18846 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.29□□□□□ -1.56
ATF1P18846 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.29□□□□□ -1.56
ATF1P18846 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ATF1P18846 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 RN7SKP128-201ENST00000364270 303 ntBASIC5.29□□□□□ -1.56
ATF1P18846 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 SNORD94-201ENST00000386037 137 ntBASIC5.29□□□□□ -1.56
ATF1P18846 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.29□□□□□ -1.56
ATF1P18846 AL360013.1-201ENST00000419031 858 ntBASIC5.29□□□□□ -1.56
ATF1P18846 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 AC112492.2-201ENST00000432774 1030 ntBASIC5.29□□□□□ -1.56
ATF1P18846 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 OR2L9P-201ENST00000444456 913 ntBASIC5.29□□□□□ -1.56
ATF1P18846 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.29□□□□□ -1.56
ATF1P18846 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 RPL23AP60-201ENST00000450011 454 ntBASIC5.29□□□□□ -1.56
ATF1P18846 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.29□□□□□ -1.56
ATF1P18846 AC015524.1-201ENST00000491585 472 ntBASIC5.29□□□□□ -1.56
ATF1P18846 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.29□□□□□ -1.56
ATF1P18846 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 AC131935.1-201ENST00000524621 333 ntBASIC5.29□□□□□ -1.56
ATF1P18846 CYCSP25-201ENST00000525280 316 ntBASIC5.29□□□□□ -1.56
ATF1P18846 AC135983.3-201ENST00000528049 1226 ntBASIC5.29□□□□□ -1.56
ATF1P18846 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 DPPA3P2-202ENST00000557188 1219 ntBASIC5.29□□□□□ -1.56
ATF1P18846 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.29□□□□□ -1.56
ATF1P18846 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 RN7SL261P-201ENST00000613441 282 ntBASIC5.29□□□□□ -1.56
ATF1P18846 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
ATF1P18846 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF1P18846 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.29□□□□□ -1.56
ATF1P18846 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
ATF1P18846 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 AC114774.1-201ENST00000507410 1770 ntBASIC5.29□□□□□ -1.56
ATF1P18846 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.29□□□□□ -1.56
ATF1P18846 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF1P18846 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATF1P18846 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATF1P18846 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.28□□□□□ -1.56
ATF1P18846 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATF1P18846 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.28□□□□□ -1.56
ATF1P18846 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATF1P18846 AC217777.1-201ENST00000570034 1471 ntBASIC5.28□□□□□ -1.56
ATF1P18846 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.28□□□□□ -1.56
ATF1P18846 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
ATF1P18846 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms