Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.71□□□□□ -1.34
CHRNA1P02708 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
CHRNA1P02708 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA1P02708 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
CHRNA1P02708 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CHRNA1P02708 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.7□□□□□ -1.34
CHRNA1P02708 CYP4F30P-202ENST00000420048 405 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 AC245884.2-201ENST00000426257 404 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA1P02708 AL512637.1-201ENST00000439523 1231 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 AL355355.1-201ENST00000442900 793 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA1P02708 AC068522.1-201ENST00000482895 345 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.7□□□□□ -1.34
CHRNA1P02708 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.7□□□□□ -1.34
CHRNA1P02708 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.7□□□□□ -1.34
CHRNA1P02708 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.7□□□□□ -1.34
CHRNA1P02708 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA1P02708 AC141002.1-201ENST00000607025 279 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 AC012254.5-201ENST00000623573 478 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA1P02708 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.7□□□□□ -1.34
CHRNA1P02708 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CHRNA1P02708 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA1P02708 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CHRNA1P02708 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 AP001541.1-201ENST00000623322 1904 ntBASIC6.7□□□□□ -1.34
CHRNA1P02708 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA1P02708 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CHRNA1P02708 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.7□□□□□ -1.34
CHRNA1P02708 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA1P02708 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA1P02708 AC093829.1-201ENST00000506662 1618 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 AP002370.1-201ENST00000528055 1602 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 RBPJP7-201ENST00000442803 1447 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 RBPJP5-201ENST00000449433 1447 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA1P02708 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CHRNA1P02708 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA1P02708 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 AC245060.4-201ENST00000413293 1121 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.69□□□□□ -1.34
CHRNA1P02708 GEMIN2P1-201ENST00000454246 752 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 AC023141.9-201ENST00000458734 412 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA1P02708 RN7SL284P-201ENST00000498823 275 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 SETP21-201ENST00000514799 892 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 WBP1LP3-201ENST00000523033 208 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 RPA2P3-201ENST00000533268 770 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 MIR3189-201ENST00000578735 73 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 MIR4776-2-201ENST00000580204 80 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA1P02708 BX323046.1-201ENST00000610145 535 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 AL137067.2-201ENST00000621202 131 ntBASIC6.69□□□□□ -1.34
CHRNA1P02708 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA1P02708 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA1P02708 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA1P02708 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHRNA1P02708 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.69□□□□□ -1.34
CHRNA1P02708 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA1P02708 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CHRNA1P02708 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CHRNA1P02708 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA1P02708 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CHRNA1P02708 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CHRNA1P02708 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA1P02708 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA1P02708 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHRNA1P02708 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CHRNA1P02708 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.68□□□□□ -1.34
CHRNA1P02708 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms