Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.63□□□□□ -1.51
SPTA1P02549 AC015802.2-201ENST00000589690 189 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC5.63□□□□□ -1.51
SPTA1P02549 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SPTA1P02549 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SPTA1P02549 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC5.63□□□□□ -1.51
SPTA1P02549 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.63□□□□□ -1.51
SPTA1P02549 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 AL445238.1-204ENST00000400311 463 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 AL139128.1-201ENST00000413921 941 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 AC011225.1-201ENST00000457751 369 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 AC092905.1-201ENST00000467527 949 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.63□□□□□ -1.51
SPTA1P02549 AC106800.3-201ENST00000511389 308 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 RN7SKP66-201ENST00000516681 231 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.63□□□□□ -1.51
SPTA1P02549 OR4A42P-201ENST00000531397 938 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 HMGN2P6-201ENST00000551091 273 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.63□□□□□ -1.51
SPTA1P02549 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.63□□□□□ -1.51
SPTA1P02549 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.63□□□□□ -1.51
SPTA1P02549 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SPTA1P02549 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC5.62□□□□□ -1.51
SPTA1P02549 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 AL109941.1-201ENST00000401925 229 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.62□□□□□ -1.51
SPTA1P02549 RPS7P14-201ENST00000426405 583 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 RPS23P6-201ENST00000466136 431 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 BX284632.1-201ENST00000478218 541 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 AC108693.1-201ENST00000496068 432 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.62□□□□□ -1.51
SPTA1P02549 HMGN2P36-201ENST00000529541 409 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.62□□□□□ -1.51
SPTA1P02549 AC079395.2-201ENST00000610982 737 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 AC021766.1-201ENST00000624404 741 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SPTA1P02549 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SPTA1P02549 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.62□□□□□ -1.51
SPTA1P02549 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPTA1P02549 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 AL356317.1-201ENST00000396110 1436 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 AC023421.1-201ENST00000590535 1785 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.62□□□□□ -1.51
SPTA1P02549 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.62□□□□□ -1.51
SPTA1P02549 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.62□□□□□ -1.51
SPTA1P02549 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.62□□□□□ -1.51
SPTA1P02549 AC090958.1-201ENST00000511122 351 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.62□□□□□ -1.51
SPTA1P02549 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.62□□□□□ -1.51
SPTA1P02549 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
SPTA1P02549 AL591167.1-201ENST00000607321 456 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 AC068870.2-201ENST00000620635 389 ntBASIC5.62□□□□□ -1.51
SPTA1P02549 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.62□□□□□ -1.51
SPTA1P02549 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC5.61□□□□□ -1.51
SPTA1P02549 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.61□□□□□ -1.51
SPTA1P02549 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.61□□□□□ -1.51
SPTA1P02549 AC119674.1-202ENST00000641333 1860 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 Z97989.1-201ENST00000531702 2421 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.61□□□□□ -1.51
SPTA1P02549 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SPTA1P02549 AC023818.2-201ENST00000623817 2304 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 AP005139.1-201ENST00000580702 1647 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 GAPDHP24-201ENST00000328713 983 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 CYB5AP4-201ENST00000396692 399 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 RPL35AP3-201ENST00000414680 288 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPTA1P02549 GEMIN2P1-201ENST00000454246 752 ntBASIC5.61□□□□□ -1.51
SPTA1P02549 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms