Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.78□□□□□ -1.32
FOXN3O00409 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 AP001002.1-201ENST00000625148 1513 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.78□□□□□ -1.32
FOXN3O00409 SNORA70H-201ENST00000383910 135 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 SNORA70J-201ENST00000384182 135 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 SNORD94-201ENST00000386037 137 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 CCNB2P1-201ENST00000399411 1150 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 TRIM60P17-201ENST00000415181 719 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.78□□□□□ -1.32
FOXN3O00409 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.78□□□□□ -1.32
FOXN3O00409 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.78□□□□□ -1.32
FOXN3O00409 SDR42E1P3-201ENST00000438345 502 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 RPS27AP3-201ENST00000453803 454 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 VPS25P1-201ENST00000455691 508 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 AC005017.1-201ENST00000482002 490 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 AC090543.1-201ENST00000492168 485 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 AC138409.2-202ENST00000507274 458 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 AC009879.1-201ENST00000520029 839 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.78□□□□□ -1.32
FOXN3O00409 MIR5010-201ENST00000582846 120 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 AC098483.2-201ENST00000603158 454 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 OR51C1P-201ENST00000608504 942 ntBASIC6.78□□□□□ -1.32
FOXN3O00409 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.78□□□□□ -1.32
FOXN3O00409 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
FOXN3O00409 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
FOXN3O00409 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.78□□□□□ -1.32
FOXN3O00409 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
FOXN3O00409 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
FOXN3O00409 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXN3O00409 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
FOXN3O00409 AL031681.1-201ENST00000443304 400 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 OR13K1P-201ENST00000444577 975 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 VN1R48P-201ENST00000448149 1036 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 MTND6P5-201ENST00000448266 512 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AP002345.1-201ENST00000456493 928 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 RPS4XP17-201ENST00000479057 754 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 RN7SL502P-201ENST00000481857 290 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 HMGB1P47-201ENST00000511281 589 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 SETP21-201ENST00000514799 892 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 OR4A40P-201ENST00000533878 948 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXN3O00409 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 AC009729.1-201ENST00000548873 1133 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXN3O00409 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXN3O00409 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXN3O00409 OR4H6P-201ENST00000563771 921 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXN3O00409 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXN3O00409 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 AC022001.1-201ENST00000605193 268 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXN3O00409 AC253576.2-201ENST00000618815 580 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXN3O00409 CR382285.2-201ENST00000624662 1495 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 AL136984.1-201ENST00000607611 1893 ntBASIC6.77□□□□□ -1.33
FOXN3O00409 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
FOXN3O00409 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXN3O00409 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXN3O00409 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXN3O00409 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXN3O00409 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXN3O00409 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.76□□□□□ -1.33
FOXN3O00409 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXN3O00409 AP001541.1-201ENST00000623322 1904 ntBASIC6.76□□□□□ -1.33
FOXN3O00409 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXN3O00409 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms