Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.56□□□□□ -1.36
O00370 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 AC073594.1-201ENST00000462065 364 ntBASIC6.56□□□□□ -1.36
O00370 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.56□□□□□ -1.36
O00370 AC091874.2-201ENST00000505889 720 ntBASIC6.56□□□□□ -1.36
O00370 AC018797.1-201ENST00000510791 255 ntBASIC6.56□□□□□ -1.36
O00370 AC090958.1-201ENST00000511122 351 ntBASIC6.56□□□□□ -1.36
O00370 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.56□□□□□ -1.36
O00370 AC021733.2-201ENST00000518830 497 ntBASIC6.56□□□□□ -1.36
O00370 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.56□□□□□ -1.36
O00370 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.56□□□□□ -1.36
O00370 AC105036.1-201ENST00000566222 271 ntBASIC6.56□□□□□ -1.36
O00370 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.56□□□□□ -1.36
O00370 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.56□□□□□ -1.36
O00370 AL360012.1-201ENST00000602813 131 ntBASIC6.56□□□□□ -1.36
O00370 AC008555.7-201ENST00000605008 583 ntBASIC6.56□□□□□ -1.36
O00370 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.56□□□□□ -1.36
O00370 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.56□□□□□ -1.36
O00370 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.56□□□□□ -1.36
O00370 AC073488.6-201ENST00000632293 754 ntBASIC6.56□□□□□ -1.36
O00370 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
O00370 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
O00370 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
O00370 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.56□□□□□ -1.36
O00370 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
O00370 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.56□□□□□ -1.36
O00370 SHQ1P1-201ENST00000437111 1544 ntBASIC6.55□□□□□ -1.36
O00370 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
O00370 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
O00370 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.55□□□□□ -1.36
O00370 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.55□□□□□ -1.36
O00370 AC007562.1-201ENST00000421819 517 ntBASIC6.55□□□□□ -1.36
O00370 KATNBL1P2-201ENST00000433311 835 ntBASIC6.55□□□□□ -1.36
O00370 OR3D1P-201ENST00000438288 955 ntBASIC6.55□□□□□ -1.36
O00370 AL390879.1-201ENST00000439143 386 ntBASIC6.55□□□□□ -1.36
O00370 AC023274.2-201ENST00000445264 521 ntBASIC6.55□□□□□ -1.36
O00370 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.55□□□□□ -1.36
O00370 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.55□□□□□ -1.36
O00370 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.55□□□□□ -1.36
O00370 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.55□□□□□ -1.36
O00370 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.55□□□□□ -1.36
O00370 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.55□□□□□ -1.36
O00370 RNU4ATAC-201ENST00000580972 127 ntBASIC6.55□□□□□ -1.36
O00370 AC009779.8-202ENST00000607990 932 ntBASIC6.55□□□□□ -1.36
O00370 AC116667.2-201ENST00000641075 823 ntBASIC6.55□□□□□ -1.36
O00370 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
O00370 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
O00370 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.55□□□□□ -1.36
O00370 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.55□□□□□ -1.36
O00370 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
O00370 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 CCNT2P1-201ENST00000423082 1315 ntBASIC6.54□□□□□ -1.36
O00370 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
O00370 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
O00370 GNG5P2-201ENST00000372054 207 ntBASIC6.54□□□□□ -1.36
O00370 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
O00370 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.54□□□□□ -1.36
O00370 NPM1P38-201ENST00000403835 865 ntBASIC6.54□□□□□ -1.36
O00370 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 MIR1275-201ENST00000408770 80 ntBASIC6.54□□□□□ -1.36
O00370 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.54□□□□□ -1.36
O00370 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.54□□□□□ -1.36
O00370 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 IGLV3-4-201ENST00000432300 244 ntBASIC6.54□□□□□ -1.36
O00370 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.54□□□□□ -1.36
O00370 AL136455.1-201ENST00000441083 1240 ntBASIC6.54□□□□□ -1.36
O00370 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.54□□□□□ -1.36
O00370 AC010240.2-201ENST00000445363 1205 ntBASIC6.54□□□□□ -1.36
O00370 EEF1B2P3-201ENST00000447718 678 ntBASIC6.54□□□□□ -1.36
O00370 AC009963.4-201ENST00000448535 339 ntBASIC6.54□□□□□ -1.36
O00370 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.54□□□□□ -1.36
O00370 AL355032.1-201ENST00000472981 438 ntBASIC6.54□□□□□ -1.36
O00370 AP002453.1-201ENST00000492327 668 ntBASIC6.54□□□□□ -1.36
O00370 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.54□□□□□ -1.36
O00370 OR7E99P-201ENST00000505750 922 ntBASIC6.54□□□□□ -1.36
O00370 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms