Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC112503.2-201ENST00000609005 552 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC016957.2-201ENST00000616998 848 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 MRPL57P1-201ENST00000621486 265 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 IFIT1P1-201ENST00000400497 1449 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 RPL31P11-201ENST00000426558 1558 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 DNM1P47-203ENST00000571780 12667 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 GCNT1P4-201ENST00000404096 329 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 RPL21P50-201ENST00000417698 477 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC125238.2-201ENST00000430003 1440 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC069154.1-201ENST00000432914 542 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 RN7SL561P-201ENST00000488553 281 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 SNX18P25-201ENST00000510539 758 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 RNA5SP116-201ENST00000516132 98 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL162377.2-201ENST00000624532 337 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 ZNF402P-201ENST00000404435 3100 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL359694.2-201ENST00000567753 1615 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 AL157831.2-201ENST00000564681 3095 ntBASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTDP1Q9Y5B0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 SNORA81-201ENST00000408493 178 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 RN7SKP281-201ENST00000410472 352 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 ZFAND6P1-201ENST00000434138 605 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 RPS10P18-201ENST00000442662 495 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AP002884.1-201ENST00000479691 655 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AP003102.1-201ENST00000525638 661 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AP003049.1-201ENST00000529418 457 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 MTND5P21-201ENST00000531961 522 ntBASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.47□□□□□ -1.21
CTDP1Q9Y5B0 FXNP1-201ENST00000555153 337 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms