Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AC008937.3-201ENST00000606813 1700 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 HMGB1P20-201ENST00000402555 677 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 RPS4XP5-201ENST00000419038 768 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AC108693.1-201ENST00000496068 432 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AC093763.2-201ENST00000505334 1223 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 OR4A42P-201ENST00000531397 938 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 AL355974.3-201ENST00000617383 467 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 CU639417.4-201ENST00000623928 207 ntBASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 SNRPEP6-201ENST00000407465 277 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC002504.1-201ENST00000438281 691 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 CUBNP2-201ENST00000443534 1139 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC091685.2-201ENST00000454924 864 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC083795.1-201ENST00000491760 320 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 RN7SL57P-201ENST00000493687 290 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC105420.1-201ENST00000504389 582 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 uc_338.26-201ENST00000612659 160 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 ATM-229ENST00000639953 587 ntTSL 5 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 AL161901.1-201ENST00000624954 3425 ntBASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SHANK2Q9UPX8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AC008124.1-201ENST00000609803 9730 ntBASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 RNA5SP375-201ENST00000362975 119 ntBASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 RPL21P133-201ENST00000443666 476 ntBASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AL133445.1-201ENST00000467051 452 ntBASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AP001496.3-201ENST00000580230 913 ntBASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 AC011497.2-201ENST00000600255 639 ntBASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
SHANK2Q9UPX8 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 AC103591.2-201ENST00000265259 766 ntBASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 RNA5SP394-201ENST00000364216 119 ntBASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 RPS12P17-201ENST00000438591 377 ntBASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 AL139099.4-201ENST00000614802 114 ntBASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 OR11H2-202ENST00000641517 1085 ntBASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms