Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 RNU6-157P-201ENST00000383957 107 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 OLA1P1-201ENST00000396387 1189 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 RN7SKP86-201ENST00000410454 332 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 VDAC1P10-201ENST00000416715 891 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC092042.2-201ENST00000417304 331 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 USP9YP22-201ENST00000438971 294 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC138853.1-201ENST00000503549 823 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 HIGD1AP10-201ENST00000527837 282 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL139174.1-201ENST00000531489 886 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 SERPINE4P-201ENST00000554978 281 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 MIR3154-201ENST00000577829 84 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 MIR212-201ENST00000586026 110 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC087683.1-201ENST00000591187 441 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 VN1R83P-201ENST00000595685 445 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL390877.1-201ENST00000605704 214 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 FRG1HP-204ENST00000617940 757 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AL359715.3-201ENST00000569267 2123 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 ZNF833P-201ENST00000424938 1494 ntBASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
ZC3H4Q9UPT8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 MRPS17P1-201ENST00000596009 3130 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 RNU1-5P-201ENST00000362684 144 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 RNU6-797P-201ENST00000363101 109 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 RNU6-1331P-201ENST00000363658 106 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 EIF1P1-201ENST00000421436 341 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 PNRC2P1-201ENST00000423940 420 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms