Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SNORA43.1-201ENST00000364863 140 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 PPP1R11P1-201ENST00000486095 376 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 RN7SL362P-201ENST00000494228 267 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AC106822.1-201ENST00000502647 526 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 ZNF519P4-201ENST00000514008 125 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 NPIPB14P-203ENST00000532298 987 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AL591167.1-201ENST00000607321 456 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AL135999.3-201ENST00000610501 812 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 CCNT2P1-201ENST00000423082 1315 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AC024651.2-201ENST00000562480 2098 ntBASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CTNNA3Q9UI47 AL133243.2-201ENST00000610331 1621 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AL359091.1-201ENST00000449048 1734 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 RNA5SP433-201ENST00000364491 114 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 LCN1P2-201ENST00000372030 223 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 SNORA11B-201ENST00000408175 129 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 TMA16P2-201ENST00000413187 601 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC007562.1-201ENST00000421819 517 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC079922.1-201ENST00000443291 359 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 GAPDHP23-201ENST00000444823 993 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC023274.2-201ENST00000445264 521 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 RPL34P33-201ENST00000486062 334 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC090958.1-201ENST00000511122 351 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 RN7SKP67-201ENST00000515905 235 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 OR6M2P-201ENST00000529831 871 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AL845552.1-201ENST00000556820 323 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC005726.4-201ENST00000582858 458 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AP001823.1-201ENST00000604056 1003 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 RPSAP75-201ENST00000605848 301 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC003992.1-201ENST00000635364 557 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 HDAC1P2-201ENST00000453661 1398 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AL353763.1-201ENST00000624467 1628 ntBASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CTNNA3Q9UI47 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 OR7E156P-201ENST00000400303 464 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AL022319.1-201ENST00000458183 1167 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AC018797.1-201ENST00000510791 255 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AC108103.1-201ENST00000511286 446 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 Y_RNA.710-201ENST00000516975 110 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AP001804.1-201ENST00000526868 919 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AC006512.2-201ENST00000543250 486 ntBASIC7.4□□□□□ -1.22
CTNNA3Q9UI47 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms