Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AL132875.1-201ENST00000403623 949 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AL451136.1-201ENST00000435399 325 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 SEPT14P12-201ENST00000442280 560 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 RN7SKP238-201ENST00000516483 249 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 RNA5SP340-201ENST00000517132 107 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 RNA5SP400-201ENST00000517155 111 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 TRIM77BP-201ENST00000524985 1119 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 KCTD9P4-201ENST00000526766 1166 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 MIR3189-201ENST00000578735 73 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC008555.7-201ENST00000605008 583 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 OR7A1P-202ENST00000641542 1158 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC022325.1-201ENST00000502748 2199 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 CDY5P-201ENST00000411487 1580 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 CDY9P-201ENST00000451397 1580 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 CASC19-238ENST00000641523 1558 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 MTCO1P28-201ENST00000574177 1528 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC005618.1-201ENST00000606901 3148 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC112243.1-201ENST00000623949 3851 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 RPL35AP31-201ENST00000418340 337 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 ATP5LP2-201ENST00000440646 311 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC009237.1-201ENST00000442127 744 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC090568.1-201ENST00000509499 856 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC007956.1-201ENST00000555623 542 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC015982.1-201ENST00000608113 465 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC073488.3-201ENST00000631611 778 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 RBMY1HP-201ENST00000382759 1389 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC011369.2-201ENST00000624423 1567 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 AC089998.1-201ENST00000548575 3141 ntBASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCF1Q9UBD9 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC105749.1-201ENST00000631338 2008 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC007998.4-201ENST00000612496 2533 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 SNX18P3-202ENST00000565670 1750 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 DNM1P47-203ENST00000571780 12667 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms