Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.15□□□□□ -1.43
LRFN1Q9P244 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.15□□□□□ -1.43
LRFN1Q9P244 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 MAPK10-365ENST00000641902 3825 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 RNU6-650P-201ENST00000365658 111 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 RNU6-31P-201ENST00000384388 108 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 RNU6-1263P-201ENST00000384601 106 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 RNU6-1176P-201ENST00000390955 107 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 YWHAZP4-201ENST00000392459 708 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 VIM2P-201ENST00000402383 1294 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 GPN3P1-201ENST00000423883 535 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 COL11A2P1-205ENST00000441798 676 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 EIF2S2P5-201ENST00000457635 968 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 RPL5P13-201ENST00000462840 709 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 NPM1P17-201ENST00000479221 602 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC011352.2-201ENST00000514574 1016 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 RN7SKP70-201ENST00000516655 271 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC093014.1-201ENST00000548926 724 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC018558.5-201ENST00000565840 952 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 MIR4310-201ENST00000582950 57 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC015911.5-201ENST00000587076 451 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 DNAJC19P3-201ENST00000594491 331 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 SNX6P1-201ENST00000601728 1224 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC025171.4-201ENST00000607250 1047 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC005828.7-201ENST00000607331 556 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 AC091768.1-201ENST00000609258 930 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
LRFN1Q9P244 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 Z97989.1-201ENST00000531702 2421 ntBASIC6.14□□□□□ -1.43
LRFN1Q9P244 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
LRFN1Q9P244 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LRFN1Q9P244 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 AC020658.2-201ENST00000559030 4020 ntBASIC6.13□□□□□ -1.43
LRFN1Q9P244 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 AL033543.1-201ENST00000623440 13454 ntBASIC6.13□□□□□ -1.43
LRFN1Q9P244 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRFN1Q9P244 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRFN1Q9P244 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRFN1Q9P244 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRFN1Q9P244 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
LRFN1Q9P244 RAD1P1-201ENST00000231383 813 ntBASIC6.13□□□□□ -1.43
LRFN1Q9P244 PPIAP24-201ENST00000328558 471 ntBASIC6.13□□□□□ -1.43
LRFN1Q9P244 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LRFN1Q9P244 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LRFN1Q9P244 RNU6-792P-201ENST00000363490 107 ntBASIC6.13□□□□□ -1.43
LRFN1Q9P244 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms