Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 TRAV35-201ENST00000390462 330 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AL391419.1-201ENST00000398901 1275 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AL139184.1-202ENST00000422303 222 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 VTI1BP4-201ENST00000427516 527 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC063955.1-201ENST00000462872 685 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 TRBV5-2-201ENST00000489095 273 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 RPL5P14-201ENST00000494197 878 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 GOLGA5P1-201ENST00000507317 980 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC113191.1-201ENST00000517759 403 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 OR9G2P-201ENST00000533326 880 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 RPL29P33-201ENST00000587474 316 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 NPIPB1P-202ENST00000588786 828 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC107993.1-201ENST00000591343 684 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC022001.1-201ENST00000605193 268 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AC068213.1-201ENST00000625124 226 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 BCORP1-203ENST00000513194 5093 ntBASIC5.7□□□□□ -1.5
CCNB1IP1Q9NPC3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 ICE2P1-201ENST00000512800 1849 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC239868.2-201ENST00000564237 4527 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 SNORD94-201ENST00000386037 137 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AL158827.1-201ENST00000416300 391 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AL354707.3-201ENST00000427308 331 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 RN7SL413P-201ENST00000482700 297 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC093870.1-201ENST00000506837 213 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 snoU109.5-201ENST00000516231 132 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 OR8Q1P-201ENST00000526467 655 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 RPL3P13-201ENST00000550415 216 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC023968.1-201ENST00000560719 475 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 PPIAP14-201ENST00000577627 496 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AL139041.1-201ENST00000605480 610 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AP001541.1-201ENST00000623322 1904 ntBASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCNB1IP1Q9NPC3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms