Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AC069154.1-201ENST00000432914 542 ntBASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AC094019.1-201ENST00000434678 472 ntBASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 POU5F1P5-201ENST00000445059 658 ntBASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AL445687.2-201ENST00000458156 728 ntBASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AL355032.1-201ENST00000472981 438 ntBASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 AC010325.3-201ENST00000641084 394 ntBASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.24
UPF3BQ9BZI7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
UPF3BQ9BZI7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 EIF3EP1-201ENST00000433978 1316 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 ZNF101P1-201ENST00000435701 1720 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 RNA5SP431-201ENST00000410312 120 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AL360013.1-201ENST00000419031 858 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC016027.5-201ENST00000427227 210 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 PPIAP10-201ENST00000438675 458 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 RN7SL362P-201ENST00000494228 267 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC112484.3-201ENST00000505910 329 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 RN7SKP248-201ENST00000516278 305 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 OR6M2P-201ENST00000529831 871 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 GLYATL1P2-202ENST00000588046 902 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 MIR132-201ENST00000591554 101 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AL136097.3-201ENST00000611097 505 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 MIR6721-201ENST00000617181 87 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC009135.2-201ENST00000624136 1768 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
UPF3BQ9BZI7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 RBBP4P5-201ENST00000398583 1266 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AC091874.2-201ENST00000505889 720 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 IGKV3D-34-201ENST00000522638 302 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 OR1E3-201ENST00000575608 948 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AC004890.3-201ENST00000605566 1095 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AL365181.4-201ENST00000609800 547 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AC026124.2-201ENST00000621847 656 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AL122023.1-201ENST00000622847 530 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 AKAP17BP-201ENST00000431706 2719 ntBASIC7.32□□□□□ -1.24
UPF3BQ9BZI7 MAPK10-270ENST00000641102 3538 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms