Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.78□□□□□ -1.64
VGLL1Q99990 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 MIR133A2-201ENST00000347538 102 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 RNA5SP382-201ENST00000363355 112 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 RNA5SP429-201ENST00000363688 109 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC074375.1-201ENST00000372993 192 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 U3.52-201ENST00000384034 216 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC245036.1-201ENST00000391727 309 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AL391419.1-201ENST00000398901 1275 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AL139135.1-201ENST00000412675 209 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AL590762.3-201ENST00000436372 640 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC114878.1-201ENST00000441166 358 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AL158214.1-201ENST00000444423 404 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AL121578.2-201ENST00000448797 447 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC025181.1-201ENST00000477507 416 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 RPL7AP30-201ENST00000482859 796 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC025423.2-201ENST00000537570 439 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 RPL41P2-201ENST00000544920 409 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.78□□□□□ -1.64
VGLL1Q99990 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 MTND4LP25-201ENST00000570218 163 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC020978.7-201ENST00000575953 1187 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AL021368.3-201ENST00000607119 578 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 MIR8082-201ENST00000612488 81 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 RAB28P4-201ENST00000622233 665 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AP003108.4-201ENST00000623917 878 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.78□□□□□ -1.64
VGLL1Q99990 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.78□□□□□ -1.64
VGLL1Q99990 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 RBPJP6-201ENST00000411556 1431 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 GUCY1B2-204ENST00000531898 1979 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 AC022306.1-201ENST00000560489 1562 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VGLL1Q99990 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 MTND4P21-201ENST00000453886 1357 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
VGLL1Q99990 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VGLL1Q99990 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.77□□□□□ -1.65
VGLL1Q99990 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 CASC19-260ENST00000641828 2001 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VGLL1Q99990 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
VGLL1Q99990 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VGLL1Q99990 RNA5SP140-201ENST00000364524 92 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
VGLL1Q99990 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VGLL1Q99990 AL451061.1-201ENST00000407887 862 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 AL139100.1-201ENST00000408001 498 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.77□□□□□ -1.65
VGLL1Q99990 RN7SKP281-201ENST00000410472 352 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VGLL1Q99990 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.77□□□□□ -1.65
VGLL1Q99990 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.77□□□□□ -1.65
VGLL1Q99990 MTND1P10-201ENST00000426108 832 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.77□□□□□ -1.65
VGLL1Q99990 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 RPL3P11-201ENST00000434028 1146 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.77□□□□□ -1.65
VGLL1Q99990 AC079922.1-201ENST00000443291 359 ntBASIC4.77□□□□□ -1.65
VGLL1Q99990 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms