Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC092634.1-201ENST00000366505 199 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 RN7SKP91-201ENST00000410852 288 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 PTPN2P1-201ENST00000423212 1072 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AHCYP8-201ENST00000425108 209 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 MORF4-201ENST00000447135 971 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AL162739.1-201ENST00000450606 307 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 OR52E7P-201ENST00000452394 933 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC073594.1-201ENST00000462065 364 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 UOX-201ENST00000471089 899 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 RN7SL836P-201ENST00000476140 296 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC009567.2-201ENST00000502989 349 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC024267.2-201ENST00000582737 417 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 RAB28P4-201ENST00000622233 665 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AL161912.4-201ENST00000623889 2468 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC239868.2-201ENST00000564237 4527 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 RN7SKP146-201ENST00000410242 334 ntBASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 SETP4-201ENST00000455717 868 ntBASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 RN7SL714P-201ENST00000487050 298 ntBASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 TPRX1P1-201ENST00000557620 319 ntBASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 AC211486.4-201ENST00000621495 113 ntBASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 AC127071.2-201ENST00000623293 527 ntBASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 LINC02495-203ENST00000636704 242 ntBASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC112Q8NEF3 ZNF969P-201ENST00000510345 2341 ntBASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 AC114774.1-201ENST00000507410 1770 ntBASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 RN7SKP128-201ENST00000364270 303 ntBASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 U3.52-201ENST00000384034 216 ntBASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 GAPDHP34-201ENST00000432112 823 ntBASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC112Q8NEF3 RPSAP40-201ENST00000442343 891 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms