Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 RNA5SP155-201ENST00000411154 129 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 UBE2V1P14-201ENST00000415815 558 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AL157884.1-201ENST00000424561 454 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 RPL5P33-201ENST00000487833 905 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AC018645.1-201ENST00000505003 109 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AC113398.2-201ENST00000507630 558 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 MINOS1P4-201ENST00000515470 318 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 COX6B1P4-201ENST00000519826 484 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 OR4A46P-201ENST00000527255 933 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AL133399.1-201ENST00000527476 298 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 CHEK2P2-201ENST00000554701 672 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 NPM1P5-201ENST00000557228 838 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 CR383656.5-201ENST00000547616 1340 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLIP4Q8N3C7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AL353763.1-201ENST00000624467 1628 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 CAP1P2-201ENST00000417455 1409 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 RNU1-84P-201ENST00000365447 164 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 MTND2P15-201ENST00000418575 892 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 KATNBL1P2-201ENST00000433311 835 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC103563.5-201ENST00000455643 364 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 RN7SL83P-201ENST00000468131 297 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 RN7SL790P-201ENST00000474043 298 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 OR9A1P-202ENST00000484361 945 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC122714.1-201ENST00000502510 459 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 OR9G2P-201ENST00000533326 880 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 GMCL1P2-201ENST00000605230 823 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 AL008582.1-201ENST00000609612 442 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 MIR6070-201ENST00000613967 103 ntBASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.86□□□□□ -1.47
CLIP4Q8N3C7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP4Q8N3C7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CLIP4Q8N3C7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLIP4Q8N3C7 ZNF101P1-201ENST00000435701 1720 ntBASIC5.85□□□□□ -1.47
CLIP4Q8N3C7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLIP4Q8N3C7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 362.3 ms