Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AL137141.1-201ENST00000624622 4836 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 RNA5SP156-201ENST00000410250 110 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 RN7SKP166-201ENST00000410812 305 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 RPS15AP30-201ENST00000420976 390 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 SETP9-201ENST00000423837 832 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC064862.5-201ENST00000440618 334 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AL512593.1-201ENST00000444758 779 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 RPL23AP40-201ENST00000487630 390 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 MRPL57P6-201ENST00000506570 309 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 SNX18P25-201ENST00000510539 758 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 WBP1LP11-201ENST00000586141 328 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC005899.6-201ENST00000620729 297 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC007603.3-201ENST00000636915 979 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC099654.15-201ENST00000639802 509 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 NPM1P38-201ENST00000403835 865 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 SNORA77.2-201ENST00000408571 112 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 RPL34P27-201ENST00000428810 349 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 PSMD10P2-201ENST00000432890 672 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC010086.1-201ENST00000437359 1052 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 BX679664.2-201ENST00000439282 283 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AL356121.1-201ENST00000442911 156 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC004890.1-201ENST00000461005 181 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 SNRPCP11-201ENST00000492453 205 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 RNA5SP434-201ENST00000516647 121 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC021269.1-201ENST00000526860 705 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AL583832.1-201ENST00000603227 784 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 NDUFB9P1-201ENST00000604683 510 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AL136097.3-201ENST00000611097 505 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AL138693.1-201ENST00000622219 129 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AC010325.3-201ENST00000641084 394 ntBASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDKL3Q8IVW4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDKL3Q8IVW4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDKL3Q8IVW4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDKL3Q8IVW4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms