Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC130456.1-201ENST00000565085 1363 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC092447.7-201ENST00000422212 1621 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RNU6-796P-201ENST00000391086 107 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC113608.1-201ENST00000398740 305 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL031577.2-201ENST00000404133 280 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RNU2-41P-201ENST00000410991 178 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 SNX18P13-201ENST00000412442 529 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ATG4AP1-201ENST00000416893 538 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL593856.1-201ENST00000419949 805 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 VDAC1P2-201ENST00000423609 850 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RPSAP62-201ENST00000432596 833 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 MTND3P21-201ENST00000433774 331 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 UBE2V1P8-201ENST00000437166 265 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC114755.4-201ENST00000439114 443 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL353803.3-201ENST00000444641 335 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL929410.2-201ENST00000451170 189 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC026336.1-201ENST00000466577 351 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC021006.1-201ENST00000489849 553 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RPS6P4-201ENST00000494693 758 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 OR8I1P-201ENST00000529291 931 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RN7SL697P-201ENST00000582484 299 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 U73023.1-201ENST00000603134 700 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AP000907.4-201ENST00000604143 237 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC243830.2-201ENST00000618067 630 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 AC241377.2-202ENST00000636462 997 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 SAMMSON-214ENST00000641395 1264 ntBASIC6.7□□□□□ -1.34
ATG4DQ86TL0 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
ATG4DQ86TL0 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms