Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL451046.1-201ENST00000406097 534 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 SOD1P1-201ENST00000407803 440 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 RN7SKP296-201ENST00000411185 341 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL662791.3-201ENST00000413771 776 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC019185.3-201ENST00000438805 323 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC027124.1-201ENST00000440852 466 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC006326.1-201ENST00000445465 787 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 MOB1AP2-201ENST00000446060 614 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 RPL7AP71-201ENST00000451120 739 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 RN7SL456P-201ENST00000469290 295 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 RPS26P6-201ENST00000475156 348 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 MARK2P8-201ENST00000476069 952 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC016687.1-201ENST00000482574 353 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 FABP5P6-201ENST00000510588 409 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC134698.1-201ENST00000511619 643 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC103833.1-201ENST00000517442 172 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC073916.1-201ENST00000545095 130 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 MTND1P24-201ENST00000552175 861 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC092868.3-201ENST00000560515 784 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC005632.2-201ENST00000564271 828 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 MIR3159-201ENST00000584572 74 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC006116.5-201ENST00000591936 559 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL157899.1-201ENST00000604110 936 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AL445528.2-201ENST00000620582 470 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 TRIM53CP-201ENST00000531490 1354 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 AC004014.2-201ENST00000623718 5122 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 AC011369.2-201ENST00000624423 1567 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 AC067942.1-201ENST00000488045 1493 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 RNU6-792P-201ENST00000363490 107 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 RNA5SP176-201ENST00000390956 110 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 RN7SKP30-201ENST00000411373 334 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 TMA16P2-201ENST00000413187 601 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 RPL34P27-201ENST00000428810 349 ntBASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.99□□□□□ -1.45
PTCHD4Q6ZW05 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms