Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL034546.1-201ENST00000623740 3693 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL356361.1-201ENST00000400943 1459 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC009220.2-201ENST00000489759 1751 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL050335.1-201ENST00000396909 869 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 EI24P3-201ENST00000399046 1062 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL607077.1-201ENST00000401718 499 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL139039.2-201ENST00000407436 479 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL672212.1-201ENST00000422246 400 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 MTCO1P45-201ENST00000431457 267 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC005517.1-201ENST00000452091 489 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC069277.2-201ENST00000454211 432 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 RN7SL518P-201ENST00000491887 280 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 RPS27AP18-201ENST00000515536 459 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 SNORA70.17-201ENST00000516449 133 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 CARSP2-201ENST00000520688 277 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC131935.1-201ENST00000524621 333 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 MIR4800-201ENST00000537353 80 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 NXPE2P1-201ENST00000543705 726 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC068408.1-201ENST00000577406 1144 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 RN7SL270P-201ENST00000579643 281 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 BNIP3P7-201ENST00000605641 516 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC012653.2-201ENST00000621880 420 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AL139254.2-202ENST00000641937 1156 ntBASIC5.66□□□□□ -1.5
C11orf88Q6PI97 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C11orf88Q6PI97 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC019072.1-201ENST00000604535 1551 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC011369.2-201ENST00000624423 1567 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 RNU6-1251P-201ENST00000364502 107 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 PDCL3P5-201ENST00000398028 722 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 PEX12P1-201ENST00000400284 1048 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 DHFRP5-201ENST00000406944 564 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AL136100.1-201ENST00000407696 330 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 OR51A6P-201ENST00000418680 1004 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC093084.1-201ENST00000424233 687 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 MRPS21P2-201ENST00000424704 264 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 FTLP17-201ENST00000432567 525 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC013403.1-201ENST00000436954 263 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 OR51P1P-201ENST00000447547 942 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC009963.4-201ENST00000448535 339 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AL354714.5-201ENST00000450131 590 ntBASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.65□□□□□ -1.5
C11orf88Q6PI97 RN7SL165P-201ENST00000477476 291 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms