Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC073488.9-201ENST00000631601 754 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 AC005725.1-201ENST00000577346 2607 ntBASIC6.65□□□□□ -1.34
CCDC38Q502W7 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.65□□□□□ -1.35
CCDC38Q502W7 PSMC1P6-201ENST00000477233 1319 ntBASIC6.65□□□□□ -1.35
CCDC38Q502W7 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC38Q502W7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC38Q502W7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC38Q502W7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC38Q502W7 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC38Q502W7 AC011369.2-201ENST00000624423 1567 ntBASIC6.65□□□□□ -1.35
CCDC38Q502W7 CASC19-238ENST00000641523 1558 ntBASIC6.65□□□□□ -1.35
CCDC38Q502W7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CCDC38Q502W7 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC38Q502W7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC093671.1-201ENST00000624981 2929 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 RNA5SP321-201ENST00000362722 111 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 RNA5SP382-201ENST00000363355 112 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 RN7SKP191-201ENST00000364713 306 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 RPS17P17-201ENST00000419392 409 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL672212.1-201ENST00000422246 400 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 MTND4LP14-201ENST00000429447 288 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL121578.2-201ENST00000448797 447 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 MTND5P8-201ENST00000449817 1083 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC009244.1-201ENST00000450566 258 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC108751.3-201ENST00000461814 1020 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC005017.1-201ENST00000482002 490 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC091965.3-201ENST00000506236 208 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL390198.2-201ENST00000510553 222 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 OR7E19P-202ENST00000589942 844 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL583832.1-201ENST00000603227 784 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 RPL21P136-201ENST00000605378 396 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AL137000.1-201ENST00000610528 1244 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 MIR6883-201ENST00000614952 78 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC027575.3-201ENST00000583058 2747 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 AC025470.1-201ENST00000510053 2032 ntBASIC6.64□□□□□ -1.35
CCDC38Q502W7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC38Q502W7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
CCDC38Q502W7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC38Q502W7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC38Q502W7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC38Q502W7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC38Q502W7 RNU4-39P-201ENST00000362455 127 ntBASIC6.63□□□□□ -1.35
CCDC38Q502W7 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 LCN1P2-201ENST00000372030 223 ntBASIC6.63□□□□□ -1.35
CCDC38Q502W7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC38Q502W7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC38Q502W7 ST13P16-201ENST00000401760 781 ntBASIC6.63□□□□□ -1.35
CCDC38Q502W7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC38Q502W7 AL359092.1-201ENST00000417156 265 ntBASIC6.63□□□□□ -1.35
CCDC38Q502W7 AL034379.1-201ENST00000423216 253 ntBASIC6.63□□□□□ -1.35
CCDC38Q502W7 AHCYP8-201ENST00000425108 209 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms