Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 RNA5SP232-201ENST00000364144 119 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 RNA5SP140-201ENST00000364524 92 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 PPIAP26-201ENST00000377951 522 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 UBBP1-201ENST00000392399 473 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 NPM1P37-201ENST00000403105 874 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 RPL26P37-201ENST00000411983 438 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AL512661.1-201ENST00000434586 1253 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AL645931.1-201ENST00000439737 410 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC007383.1-201ENST00000445875 636 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC121161.1-201ENST00000510606 652 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 MTCO3P27-201ENST00000514397 196 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AP003355.1-201ENST00000518956 587 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC087575.1-201ENST00000585087 229 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AF230666.2-201ENST00000602328 725 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC012175.1-201ENST00000603755 531 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC079880.2-201ENST00000603790 1213 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AL590032.1-201ENST00000604920 252 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC011891.2-201ENST00000604949 397 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC090912.3-201ENST00000609775 533 ntBASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 OLMALINC-203ENST00000641087 3779 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 RNU1-65P-201ENST00000363919 148 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MIR1275-201ENST00000408770 80 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 RN7SKP86-201ENST00000410454 332 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 RPL23AP28-201ENST00000448062 470 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AL358876.1-201ENST00000453364 1075 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MTATP6P14-201ENST00000455189 673 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 SYT14P1-201ENST00000481459 721 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC116562.1-201ENST00000485355 781 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 NAMPTP2-201ENST00000505629 1115 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 SNX18P23-201ENST00000510867 677 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 RNU5A-7P-201ENST00000515979 116 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC022826.1-201ENST00000519383 805 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC140063.1-201ENST00000541343 259 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AL591767.3-201ENST00000554632 525 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC025283.1-201ENST00000572039 734 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MIR4310-201ENST00000582950 57 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 U1.34-201ENST00000618578 162 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC073593.1-201ENST00000624500 411 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AL356118.1-201ENST00000635272 1078 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 ZNF806-201ENST00000438300 1774 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 MTND5P23-201ENST00000430812 1655 ntBASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.73□□□□□ -1.17
CCDC144BQ3MJ40 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
CCDC144BQ3MJ40 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms