Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AP000547.3-204ENST00000588548 2523 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 RN7SKP250-201ENST00000363924 321 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 THEM7P-201ENST00000419556 672 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC092651.1-201ENST00000426110 312 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC245884.2-201ENST00000426257 404 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AL645936.1-201ENST00000441979 518 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC007383.1-201ENST00000445875 636 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 AL162739.1-201ENST00000450606 307 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 RN7SL568P-201ENST00000493069 298 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC095052.1-201ENST00000509955 863 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AL136097.3-201ENST00000611097 505 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC010325.3-201ENST00000641084 394 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AL161901.1-201ENST00000624954 3425 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 AC119674.1-202ENST00000641333 1860 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 AP001157.1-201ENST00000550837 2339 ntBASIC5.85□□□□□ -1.47
HMGCS1Q01581 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HMGCS1Q01581 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCS1Q01581 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 AC016583.1-201ENST00000624221 2431 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 RNU6-316P-201ENST00000391027 107 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 RN7SKP144-201ENST00000411108 279 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 VN1R20P-201ENST00000425215 966 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 NPM1P25-201ENST00000429734 854 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 PSMD10P2-201ENST00000432890 672 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 AL390879.1-201ENST00000439143 386 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 AC097359.1-201ENST00000447946 463 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 RPL23AP60-201ENST00000450011 454 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 AC005165.2-201ENST00000466070 380 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 HMGN1P16-201ENST00000508308 283 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 AC021269.1-201ENST00000526860 705 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 MIR6889-201ENST00000613185 59 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.84□□□□□ -1.47
HMGCS1Q01581 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
HMGCS1Q01581 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCS1Q01581 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMGCS1Q01581 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
HMGCS1Q01581 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms