Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX6-1P78426 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NKX6-1P78426 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 SPATA2P1-201ENST00000431223 2055 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 RN7SKP55-201ENST00000364888 307 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 ATF1P1-201ENST00000406040 927 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 RN7SKP254-201ENST00000410685 310 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 RPS21P8-201ENST00000413365 247 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AL445183.3-201ENST00000414168 502 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX6-1P78426 PNRC2P1-201ENST00000423940 420 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX6-1P78426 PA2G4P6-201ENST00000438325 1197 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 TPTE2P3-201ENST00000441562 1189 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 CEACAMP5-201ENST00000448037 961 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 RSU1P1-201ENST00000453416 441 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AC114324.2-202ENST00000503812 134 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AC108120.2-201ENST00000512973 294 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 DCAF13P2-201ENST00000514188 555 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 RNU6-276P-201ENST00000516114 96 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 RNA5SP473-201ENST00000516402 125 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX6-1P78426 OR8G5-201ENST00000524943 1041 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AC084824.2-201ENST00000548906 345 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AC090888.3-201ENST00000558917 509 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 MTATP6P24-201ENST00000576835 677 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 SNORD39.2-201ENST00000579995 76 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 FAM106CP-201ENST00000582212 507 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.13□□□□□ -1.43
NKX6-1P78426 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 AL022067.1-201ENST00000602426 454 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 VN1R9P-201ENST00000614184 867 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX6-1P78426 RPL23AP61-201ENST00000623642 466 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX6-1P78426 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 AL358913.2-201ENST00000553881 1548 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 AC090771.1-201ENST00000585803 1618 ntBASIC6.13□□□□□ -1.43
NKX6-1P78426 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.13□□□□□ -1.43
NKX6-1P78426 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX6-1P78426 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX6-1P78426 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX6-1P78426 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NKX6-1P78426 MIR323B-201ENST00000385269 82 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX6-1P78426 AL096711.1-201ENST00000404780 554 ntBASIC6.12□□□□□ -1.43
NKX6-1P78426 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX6-1P78426 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms