Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
UBA52P62987 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.4□□□□□ -1.55
UBA52P62987 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.4□□□□□ -1.55
UBA52P62987 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UBA52P62987 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
UBA52P62987 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UBA52P62987 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
UBA52P62987 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
UBA52P62987 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.4□□□□□ -1.55
UBA52P62987 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.4□□□□□ -1.55
UBA52P62987 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
UBA52P62987 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
UBA52P62987 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
UBA52P62987 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.4□□□□□ -1.55
UBA52P62987 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UBA52P62987 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
UBA52P62987 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UBA52P62987 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UBA52P62987 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 RNA5SP433-201ENST00000364491 114 ntBASIC5.39□□□□□ -1.55
UBA52P62987 YWHAZP4-201ENST00000392459 708 ntBASIC5.39□□□□□ -1.55
UBA52P62987 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.39□□□□□ -1.55
UBA52P62987 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 AL096800.1-201ENST00000405326 893 ntBASIC5.39□□□□□ -1.55
UBA52P62987 MRPS21P5-201ENST00000417885 231 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AL354766.1-201ENST00000423396 542 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.39□□□□□ -1.55
UBA52P62987 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.39□□□□□ -1.55
UBA52P62987 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.39□□□□□ -1.55
UBA52P62987 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.39□□□□□ -1.55
UBA52P62987 POU5F1P5-201ENST00000445059 658 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 RPL7L1P3-201ENST00000455249 689 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 RPL7AP23-201ENST00000482625 776 ntBASIC5.39□□□□□ -1.55
UBA52P62987 RN7SL284P-201ENST00000498823 275 ntBASIC5.39□□□□□ -1.55
UBA52P62987 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.39□□□□□ -1.55
UBA52P62987 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 AC090568.1-201ENST00000509499 856 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 AL589765.6-201ENST00000601909 549 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AL035410.2-201ENST00000604963 864 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AC114477.1-201ENST00000605097 605 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AC015982.1-201ENST00000608113 465 ntBASIC5.39□□□□□ -1.55
UBA52P62987 RN7SL261P-201ENST00000613441 282 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.39□□□□□ -1.55
UBA52P62987 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 AL122023.1-201ENST00000622847 530 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AC025262.3-201ENST00000623666 360 ntBASIC5.39□□□□□ -1.55
UBA52P62987 AC114546.4-201ENST00000624413 369 ntBASIC5.39□□□□□ -1.55
UBA52P62987 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 BCORP1-203ENST00000513194 5093 ntBASIC5.39□□□□□ -1.55
UBA52P62987 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
UBA52P62987 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
UBA52P62987 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 AC018765.1-201ENST00000623357 3446 ntBASIC5.39□□□□□ -1.55
UBA52P62987 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UBA52P62987 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBA52P62987 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.38□□□□□ -1.55
UBA52P62987 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.38□□□□□ -1.55
UBA52P62987 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
UBA52P62987 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
UBA52P62987 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
UBA52P62987 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.38□□□□□ -1.55
UBA52P62987 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBA52P62987 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.38□□□□□ -1.55
UBA52P62987 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
UBA52P62987 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
UBA52P62987 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBA52P62987 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
UBA52P62987 PPIAP24-201ENST00000328558 471 ntBASIC5.38□□□□□ -1.55
UBA52P62987 RNU1-55P-201ENST00000365510 158 ntBASIC5.38□□□□□ -1.55
UBA52P62987 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBA52P62987 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AL121977.1-201ENST00000401636 979 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AL359694.1-201ENST00000403247 604 ntBASIC5.38□□□□□ -1.55
UBA52P62987 CYCSP17-201ENST00000407870 315 ntBASIC5.38□□□□□ -1.55
UBA52P62987 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.38□□□□□ -1.55
UBA52P62987 RANP6-201ENST00000413691 644 ntBASIC5.38□□□□□ -1.55
UBA52P62987 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms