Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.81□□□□□ -1.16
USP11P51784 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 MIR378C-201ENST00000578683 81 ntBASIC7.81□□□□□ -1.16
USP11P51784 SNORA70D-201ENST00000578836 135 ntBASIC7.81□□□□□ -1.16
USP11P51784 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 OR2AS2P-201ENST00000606902 342 ntBASIC7.81□□□□□ -1.16
USP11P51784 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
USP11P51784 AL645927.2-201ENST00000618350 349 ntBASIC7.81□□□□□ -1.16
USP11P51784 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.81□□□□□ -1.16
USP11P51784 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.81□□□□□ -1.16
USP11P51784 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
USP11P51784 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
USP11P51784 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.8□□□□□ -1.16
USP11P51784 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
USP11P51784 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 AC005832.2-201ENST00000538921 1430 ntBASIC7.8□□□□□ -1.16
USP11P51784 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 RAD1P1-201ENST00000231383 813 ntBASIC7.8□□□□□ -1.16
USP11P51784 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 MIR16-2-201ENST00000362117 81 ntBASIC7.8□□□□□ -1.16
USP11P51784 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 RNU6-1242P-201ENST00000391052 103 ntBASIC7.8□□□□□ -1.16
USP11P51784 AL355379.1-201ENST00000405542 640 ntBASIC7.8□□□□□ -1.16
USP11P51784 UBE2V1P10-201ENST00000414685 269 ntBASIC7.8□□□□□ -1.16
USP11P51784 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.8□□□□□ -1.16
USP11P51784 AC090018.1-201ENST00000434369 367 ntBASIC7.8□□□□□ -1.16
USP11P51784 AL445567.1-201ENST00000439121 144 ntBASIC7.8□□□□□ -1.16
USP11P51784 AC044797.1-201ENST00000445744 679 ntBASIC7.8□□□□□ -1.16
USP11P51784 EXTL2P1-201ENST00000446218 416 ntBASIC7.8□□□□□ -1.16
USP11P51784 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.8□□□□□ -1.16
USP11P51784 AC090114.3-201ENST00000479267 829 ntBASIC7.8□□□□□ -1.16
USP11P51784 RPS3AP43-201ENST00000479743 781 ntBASIC7.8□□□□□ -1.16
USP11P51784 OR9N1P-201ENST00000491296 333 ntBASIC7.8□□□□□ -1.16
USP11P51784 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.8□□□□□ -1.16
USP11P51784 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.8□□□□□ -1.16
USP11P51784 SNORA3.4-201ENST00000515969 96 ntBASIC7.8□□□□□ -1.16
USP11P51784 AP005902.2-201ENST00000518393 307 ntBASIC7.8□□□□□ -1.16
USP11P51784 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.8□□□□□ -1.16
USP11P51784 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.8□□□□□ -1.16
USP11P51784 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 MTCYBP41-201ENST00000528913 1123 ntBASIC7.8□□□□□ -1.16
USP11P51784 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.8□□□□□ -1.16
USP11P51784 AC022880.1-201ENST00000534017 973 ntBASIC7.8□□□□□ -1.16
USP11P51784 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 AC092865.1-201ENST00000544395 1023 ntBASIC7.8□□□□□ -1.16
USP11P51784 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 AL513477.2-201ENST00000607858 568 ntBASIC7.8□□□□□ -1.16
USP11P51784 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 AC093673.2-201ENST00000609674 331 ntBASIC7.8□□□□□ -1.16
USP11P51784 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 AL137000.1-201ENST00000610528 1244 ntBASIC7.8□□□□□ -1.16
USP11P51784 AL133243.1-201ENST00000614487 366 ntBASIC7.8□□□□□ -1.16
USP11P51784 MIR6774-201ENST00000614651 70 ntBASIC7.8□□□□□ -1.16
USP11P51784 AC015540.1-201ENST00000615828 501 ntBASIC7.8□□□□□ -1.16
USP11P51784 AC019226.1-201ENST00000625666 515 ntBASIC7.8□□□□□ -1.16
USP11P51784 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 AC099654.15-201ENST00000639802 509 ntBASIC7.8□□□□□ -1.16
USP11P51784 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.8□□□□□ -1.16
USP11P51784 DLEU2L-201ENST00000371086 3555 ntBASIC7.8□□□□□ -1.16
USP11P51784 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 AC092725.2-201ENST00000567658 1389 ntBASIC7.8□□□□□ -1.16
USP11P51784 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
USP11P51784 AC020658.2-201ENST00000559030 4020 ntBASIC7.8□□□□□ -1.16
USP11P51784 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
USP11P51784 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
USP11P51784 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms