Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCLP35914 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HMGCLP35914 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCLP35914 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGCLP35914 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGCLP35914 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCLP35914 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HMGCLP35914 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCLP35914 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGCLP35914 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCLP35914 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGCLP35914 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGCLP35914 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HMGCLP35914 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCLP35914 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.12□□□□□ -1.43
HMGCLP35914 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCLP35914 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGCLP35914 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGCLP35914 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HMGCLP35914 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCLP35914 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCLP35914 RNU105B-201ENST00000364478 208 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCLP35914 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCLP35914 RPS7P8-201ENST00000418311 581 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 RPL35AP31-201ENST00000418340 337 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AL354893.1-201ENST00000433735 348 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCLP35914 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCLP35914 AL590399.4-201ENST00000436561 601 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCLP35914 AL512593.1-201ENST00000444758 779 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 PPIAP7-201ENST00000454070 489 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 RAB28P2-201ENST00000454299 641 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AC118758.1-202ENST00000454719 225 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AC114728.1-201ENST00000488289 483 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AC021006.1-201ENST00000489849 553 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AC122718.2-201ENST00000505325 591 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCLP35914 CR383658.1-201ENST00000514609 734 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 AP000620.1-201ENST00000527147 504 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCLP35914 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCLP35914 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.12□□□□□ -1.43
HMGCLP35914 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.12□□□□□ -1.43
HMGCLP35914 RNU4ATAC-201ENST00000580972 127 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCLP35914 FAM27E2-201ENST00000619668 403 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.12□□□□□ -1.43
HMGCLP35914 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 AC092724.1-201ENST00000624623 3397 ntBASIC6.12□□□□□ -1.43
HMGCLP35914 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HMGCLP35914 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMGCLP35914 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGCLP35914 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGCLP35914 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGCLP35914 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCLP35914 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HMGCLP35914 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCLP35914 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCLP35914 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
HMGCLP35914 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.11□□□□□ -1.43
HMGCLP35914 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGCLP35914 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.11□□□□□ -1.43
HMGCLP35914 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.11□□□□□ -1.43
HMGCLP35914 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HMGCLP35914 MIR1275-201ENST00000408770 80 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 RNA5SP251-201ENST00000410614 137 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCLP35914 RPS15AP30-201ENST00000420976 390 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 HSPE1P27-201ENST00000430808 296 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 SEPT14P12-201ENST00000442280 560 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 TRIM60P16-201ENST00000444048 694 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.11□□□□□ -1.43
HMGCLP35914 AC097463.1-201ENST00000447288 481 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 UBE2V2P4-201ENST00000447495 259 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 AC068491.1-201ENST00000449539 1241 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCLP35914 KATNBL1P4-201ENST00000503545 918 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.11□□□□□ -1.43
HMGCLP35914 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.11□□□□□ -1.43
HMGCLP35914 AC023310.2-201ENST00000553844 547 ntBASIC6.11□□□□□ -1.43
HMGCLP35914 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HMGCLP35914 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms