Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.16□□□□□ -1.26
SCN4AP35499 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SCN4AP35499 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.16□□□□□ -1.26
SCN4AP35499 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.16□□□□□ -1.26
SCN4AP35499 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.16□□□□□ -1.26
SCN4AP35499 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.16□□□□□ -1.26
SCN4AP35499 MIR3189-201ENST00000578735 73 ntBASIC7.16□□□□□ -1.26
SCN4AP35499 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.16□□□□□ -1.26
SCN4AP35499 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.16□□□□□ -1.26
SCN4AP35499 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
SCN4AP35499 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SCN4AP35499 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.16□□□□□ -1.26
SCN4AP35499 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
SCN4AP35499 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.16□□□□□ -1.26
SCN4AP35499 AC068733.2-201ENST00000605434 1418 ntBASIC7.16□□□□□ -1.26
SCN4AP35499 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
SCN4AP35499 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCN4AP35499 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN4AP35499 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SCN4AP35499 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SCN4AP35499 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN4AP35499 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.15□□□□□ -1.26
SCN4AP35499 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.15□□□□□ -1.26
SCN4AP35499 OR7E116P-201ENST00000448529 957 ntBASIC7.15□□□□□ -1.26
SCN4AP35499 RPL23AP60-201ENST00000450011 454 ntBASIC7.15□□□□□ -1.26
SCN4AP35499 AC022215.1-201ENST00000481770 362 ntBASIC7.15□□□□□ -1.26
SCN4AP35499 AC093890.1-201ENST00000502554 540 ntBASIC7.15□□□□□ -1.26
SCN4AP35499 AC147055.3-201ENST00000510547 851 ntBASIC7.15□□□□□ -1.26
SCN4AP35499 NRBF2P4-201ENST00000520874 850 ntBASIC7.15□□□□□ -1.26
SCN4AP35499 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.15□□□□□ -1.26
SCN4AP35499 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.15□□□□□ -1.26
SCN4AP35499 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.15□□□□□ -1.26
SCN4AP35499 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.15□□□□□ -1.26
SCN4AP35499 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.15□□□□□ -1.26
SCN4AP35499 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.15□□□□□ -1.26
SCN4AP35499 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 TAS2R6P-201ENST00000605022 826 ntBASIC7.15□□□□□ -1.26
SCN4AP35499 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SCN4AP35499 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCN4AP35499 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
SCN4AP35499 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SCN4AP35499 AC092824.1-201ENST00000483524 576 ntBASIC7.15□□□□□ -1.27
SCN4AP35499 AC004453.1-201ENST00000487895 408 ntBASIC7.15□□□□□ -1.27
SCN4AP35499 AC008629.2-201ENST00000503783 483 ntBASIC7.15□□□□□ -1.27
SCN4AP35499 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.15□□□□□ -1.27
SCN4AP35499 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.15□□□□□ -1.27
SCN4AP35499 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.15□□□□□ -1.27
SCN4AP35499 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.15□□□□□ -1.27
SCN4AP35499 AC090510.2-201ENST00000617465 629 ntBASIC7.15□□□□□ -1.27
SCN4AP35499 AC024587.1-201ENST00000505925 2157 ntBASIC7.15□□□□□ -1.27
SCN4AP35499 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCN4AP35499 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN4AP35499 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SCN4AP35499 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
SCN4AP35499 BIN2P1-201ENST00000504996 1530 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN4AP35499 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN4AP35499 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SCN4AP35499 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
SCN4AP35499 AC023421.1-201ENST00000590535 1785 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.14□□□□□ -1.27
SCN4AP35499 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN4AP35499 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.14□□□□□ -1.27
SCN4AP35499 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 AL445928.1-201ENST00000435545 222 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.14□□□□□ -1.27
SCN4AP35499 RPL21P133-201ENST00000443666 476 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 FRG2FP-204ENST00000453982 852 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.14□□□□□ -1.27
SCN4AP35499 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN4AP35499 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCN4AP35499 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.14□□□□□ -1.27
SCN4AP35499 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.14□□□□□ -1.27
SCN4AP35499 AC012557.1-201ENST00000607115 611 ntBASIC7.14□□□□□ -1.27
SCN4AP35499 MIR6837-201ENST00000620884 64 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms