Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.53□□□□□ -1.36
CTNNA1P35221 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CTNNA1P35221 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.53□□□□□ -1.36
CTNNA1P35221 RPL21P50-201ENST00000417698 477 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CTNNA1P35221 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.53□□□□□ -1.36
CTNNA1P35221 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 HMGN1P32-201ENST00000441744 256 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.53□□□□□ -1.36
CTNNA1P35221 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.53□□□□□ -1.36
CTNNA1P35221 TREML3P-201ENST00000457327 501 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 AC073594.1-201ENST00000462065 364 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 RN7SL413P-201ENST00000482700 297 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.53□□□□□ -1.36
CTNNA1P35221 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.53□□□□□ -1.36
CTNNA1P35221 AC130364.2-201ENST00000528639 604 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 OR9G2P-201ENST00000533326 880 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.53□□□□□ -1.36
CTNNA1P35221 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.53□□□□□ -1.36
CTNNA1P35221 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.53□□□□□ -1.36
CTNNA1P35221 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.53□□□□□ -1.36
CTNNA1P35221 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.53□□□□□ -1.36
CTNNA1P35221 AL589743.6-201ENST00000611025 117 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.53□□□□□ -1.36
CTNNA1P35221 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.53□□□□□ -1.36
CTNNA1P35221 OR7E91P-202ENST00000642062 1198 ntBASIC6.53□□□□□ -1.36
CTNNA1P35221 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CTNNA1P35221 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.53□□□□□ -1.36
CTNNA1P35221 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.53□□□□□ -1.36
CTNNA1P35221 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTNNA1P35221 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CTNNA1P35221 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CTNNA1P35221 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 RNA5SP155-201ENST00000411154 129 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AC002127.1-201ENST00000421305 225 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.52□□□□□ -1.37
CTNNA1P35221 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 RPS7P14-201ENST00000426405 583 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.52□□□□□ -1.37
CTNNA1P35221 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AC090058.1-201ENST00000498788 435 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.52□□□□□ -1.37
CTNNA1P35221 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 AC023080.1-201ENST00000551663 931 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AC020916.2-201ENST00000591242 360 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AC004890.3-201ENST00000605566 1095 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.52□□□□□ -1.37
CTNNA1P35221 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AC114876.1-201ENST00000490962 1366 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 AC005261.6-201ENST00000623072 1387 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.52□□□□□ -1.37
CTNNA1P35221 CDC27P2-201ENST00000425026 1922 ntBASIC6.52□□□□□ -1.37
CTNNA1P35221 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTNNA1P35221 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CTNNA1P35221 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.52□□□□□ -1.37
CTNNA1P35221 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CTNNA1P35221 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CTNNA1P35221 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.51□□□□□ -1.37
CTNNA1P35221 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 AL359091.1-201ENST00000449048 1734 ntBASIC6.51□□□□□ -1.37
CTNNA1P35221 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CTNNA1P35221 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CTNNA1P35221 SNORA43.1-201ENST00000364863 140 ntBASIC6.51□□□□□ -1.37
CTNNA1P35221 AL096800.1-201ENST00000405326 893 ntBASIC6.51□□□□□ -1.37
CTNNA1P35221 ZNF37CP-201ENST00000406795 241 ntBASIC6.51□□□□□ -1.37
CTNNA1P35221 AL445213.1-201ENST00000412589 747 ntBASIC6.51□□□□□ -1.37
CTNNA1P35221 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTNNA1P35221 AC098592.2-201ENST00000413158 265 ntBASIC6.51□□□□□ -1.37
CTNNA1P35221 ELOBP4-201ENST00000423418 296 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms