Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A5P29400 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A5P29400 AL731556.1-201ENST00000394628 3711 ntBASIC7.08□□□□□ -1.28
COL4A5P29400 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.08□□□□□ -1.28
COL4A5P29400 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A5P29400 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 AL161912.4-201ENST00000623889 2468 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A5P29400 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 RNU1-106P-201ENST00000384382 164 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A5P29400 AL133173.1-201ENST00000423458 397 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A5P29400 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A5P29400 FABP7P2-201ENST00000429946 379 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 FTH1P10-202ENST00000430907 550 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A5P29400 AL663074.2-201ENST00000440621 479 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 AL450023.1-201ENST00000450868 751 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 AL035090.1-201ENST00000454835 332 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A5P29400 AC004453.1-201ENST00000487895 408 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 PGAM1P13-201ENST00000507497 754 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 SCARNA6.1-201ENST00000516989 238 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 OR11J2P-201ENST00000555298 907 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A5P29400 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A5P29400 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 AC023421.1-201ENST00000590535 1785 ntBASIC7.07□□□□□ -1.28
COL4A5P29400 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A5P29400 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A5P29400 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A5P29400 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A5P29400 MORF4L1P4-201ENST00000450245 976 ntBASIC7.06□□□□□ -1.28
COL4A5P29400 AC073610.1-201ENST00000489971 396 ntBASIC7.06□□□□□ -1.28
COL4A5P29400 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A5P29400 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A5P29400 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A5P29400 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A5P29400 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A5P29400 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 UGT2B27P-201ENST00000505092 1620 ntBASIC7.06□□□□□ -1.28
COL4A5P29400 FO393409.1-201ENST00000399325 1372 ntBASIC7.06□□□□□ -1.28
COL4A5P29400 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.06□□□□□ -1.28
COL4A5P29400 RPL7AP6-201ENST00000477943 801 ntBASIC7.06□□□□□ -1.28
COL4A5P29400 RPL38P3-201ENST00000484463 213 ntBASIC7.06□□□□□ -1.28
COL4A5P29400 CDC42P3-201ENST00000518493 633 ntBASIC7.06□□□□□ -1.28
COL4A5P29400 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.06□□□□□ -1.28
COL4A5P29400 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.06□□□□□ -1.28
COL4A5P29400 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A5P29400 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
COL4A5P29400 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
COL4A5P29400 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
COL4A5P29400 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 AC011379.1-201ENST00000508713 3025 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 AL109941.1-201ENST00000401925 229 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A5P29400 AC005033.1-201ENST00000428904 813 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 OR52B5P-201ENST00000435337 951 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.05□□□□□ -1.28
COL4A5P29400 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 AC108161.1-201ENST00000461060 402 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 EIF1P7-201ENST00000487533 337 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms