Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.27□□□□□ -1.25
SMARCA1P28370 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMARCA1P28370 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.26□□□□□ -1.25
SMARCA1P28370 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SMARCA1P28370 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.26□□□□□ -1.25
SMARCA1P28370 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.26□□□□□ -1.25
SMARCA1P28370 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SMARCA1P28370 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AL353626.3-201ENST00000413399 657 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AL139158.1-201ENST00000424719 340 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AC108479.1-201ENST00000431142 427 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 EEF1B2P3-201ENST00000447718 678 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AL133351.3-201ENST00000454998 193 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.26□□□□□ -1.25
SMARCA1P28370 NPM1P28-201ENST00000492269 840 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AC108103.1-201ENST00000511286 446 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 SETP12-201ENST00000514068 805 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.26□□□□□ -1.25
SMARCA1P28370 OR5D2P-201ENST00000524390 911 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AP005639.1-201ENST00000526939 192 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AC023310.2-201ENST00000553844 547 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 DPPA3P2-202ENST00000557188 1219 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AC024589.2-201ENST00000605642 1294 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 AC005899.7-201ENST00000618199 588 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 AC006213.6-201ENST00000623722 4179 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 OR51C1P-202ENST00000641159 1444 ntBASIC7.26□□□□□ -1.25
SMARCA1P28370 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.26□□□□□ -1.25
SMARCA1P28370 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMARCA1P28370 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
SMARCA1P28370 AC011815.2-201ENST00000618230 2021 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SMARCA1P28370 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMARCA1P28370 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMARCA1P28370 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AC083899.2-201ENST00000423285 1376 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.25□□□□□ -1.25
SMARCA1P28370 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SMARCA1P28370 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SMARCA1P28370 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMARCA1P28370 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SMARCA1P28370 OR11H13P-201ENST00000359695 979 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMARCA1P28370 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SMARCA1P28370 RNU11-6P-201ENST00000391127 133 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AL607077.1-201ENST00000401718 499 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.25□□□□□ -1.25
SMARCA1P28370 ZFAND6P1-201ENST00000434138 605 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 MAPRE1P3-201ENST00000435438 796 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 MRPS21P3-201ENST00000436696 262 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 RPL5P7-201ENST00000444235 813 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AL022237.1-201ENST00000446663 358 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 RANP2-201ENST00000456833 229 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 RN7SL254P-201ENST00000460609 284 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.25□□□□□ -1.25
SMARCA1P28370 RN7SL741P-201ENST00000482473 289 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 OR2A3P-201ENST00000493774 953 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AC122718.2-201ENST00000505325 591 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AC090958.1-201ENST00000511122 351 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 HSD3BP3-201ENST00000514706 994 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AC130364.2-201ENST00000528639 604 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.25□□□□□ -1.25
SMARCA1P28370 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AC026826.3-201ENST00000561747 158 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.25□□□□□ -1.25
SMARCA1P28370 MTND4LP25-201ENST00000570218 163 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 MIR3189-201ENST00000578735 73 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.25□□□□□ -1.25
SMARCA1P28370 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.25□□□□□ -1.25
SMARCA1P28370 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.25□□□□□ -1.25
SMARCA1P28370 AP001823.1-201ENST00000604056 1003 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.25□□□□□ -1.25
SMARCA1P28370 MIR6780B-201ENST00000610307 79 ntBASIC7.25□□□□□ -1.25
SMARCA1P28370 MIR6806-201ENST00000622141 64 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms