Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.75□□□□□ -1.33
XPAP23025 AL591767.3-201ENST00000554632 525 ntBASIC6.75□□□□□ -1.33
XPAP23025 AL445383.1-201ENST00000554689 874 ntBASIC6.75□□□□□ -1.33
XPAP23025 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.75□□□□□ -1.33
XPAP23025 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 AC005242.1-201ENST00000585658 438 ntBASIC6.75□□□□□ -1.33
XPAP23025 MTCO2P2-201ENST00000591258 225 ntBASIC6.75□□□□□ -1.33
XPAP23025 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.75□□□□□ -1.33
XPAP23025 AC026741.1-201ENST00000605892 482 ntBASIC6.75□□□□□ -1.33
XPAP23025 AC112503.1-201ENST00000608436 391 ntBASIC6.75□□□□□ -1.33
XPAP23025 AL137246.2-201ENST00000613439 662 ntBASIC6.75□□□□□ -1.33
XPAP23025 AC005899.7-201ENST00000618199 588 ntBASIC6.75□□□□□ -1.33
XPAP23025 AC211486.4-201ENST00000621495 113 ntBASIC6.75□□□□□ -1.33
XPAP23025 AC034229.6-201ENST00000623704 224 ntBASIC6.75□□□□□ -1.33
XPAP23025 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.75□□□□□ -1.33
XPAP23025 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
XPAP23025 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
XPAP23025 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.75□□□□□ -1.33
XPAP23025 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.75□□□□□ -1.33
XPAP23025 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
XPAP23025 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.75□□□□□ -1.33
XPAP23025 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
XPAP23025 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
XPAP23025 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.74□□□□□ -1.33
XPAP23025 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 CXADRP1-201ENST00000398098 1095 ntBASIC6.74□□□□□ -1.33
XPAP23025 RN7SKP296-201ENST00000411185 341 ntBASIC6.74□□□□□ -1.33
XPAP23025 HYALP1-201ENST00000417674 1279 ntBASIC6.74□□□□□ -1.33
XPAP23025 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.74□□□□□ -1.33
XPAP23025 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
XPAP23025 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.74□□□□□ -1.33
XPAP23025 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.74□□□□□ -1.33
XPAP23025 AC073476.1-201ENST00000452854 407 ntBASIC6.74□□□□□ -1.33
XPAP23025 RPL26P30-201ENST00000453533 435 ntBASIC6.74□□□□□ -1.33
XPAP23025 RN7SL834P-201ENST00000461450 286 ntBASIC6.74□□□□□ -1.33
XPAP23025 RN7SL393P-201ENST00000463588 296 ntBASIC6.74□□□□□ -1.33
XPAP23025 RN7SL83P-201ENST00000468131 297 ntBASIC6.74□□□□□ -1.33
XPAP23025 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 AC005017.1-201ENST00000482002 490 ntBASIC6.74□□□□□ -1.33
XPAP23025 AC015524.1-201ENST00000491585 472 ntBASIC6.74□□□□□ -1.33
XPAP23025 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.74□□□□□ -1.33
XPAP23025 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.74□□□□□ -1.33
XPAP23025 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 HMGB1P46-201ENST00000520062 610 ntBASIC6.74□□□□□ -1.33
XPAP23025 OR9G2P-201ENST00000533326 880 ntBASIC6.74□□□□□ -1.33
XPAP23025 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.74□□□□□ -1.33
XPAP23025 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.74□□□□□ -1.33
XPAP23025 ARGFXP2-201ENST00000579304 949 ntBASIC6.74□□□□□ -1.33
XPAP23025 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.74□□□□□ -1.33
XPAP23025 AP001160.4-201ENST00000596971 382 ntBASIC6.74□□□□□ -1.33
XPAP23025 AC091133.5-201ENST00000603088 301 ntBASIC6.74□□□□□ -1.33
XPAP23025 CXADRP3-202ENST00000617265 1100 ntBASIC6.74□□□□□ -1.33
XPAP23025 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
XPAP23025 AC020658.2-201ENST00000559030 4020 ntBASIC6.74□□□□□ -1.33
XPAP23025 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
XPAP23025 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
XPAP23025 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.74□□□□□ -1.33
XPAP23025 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
XPAP23025 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.74□□□□□ -1.33
XPAP23025 AC079949.2-201ENST00000617117 2933 ntBASIC6.73□□□□□ -1.33
XPAP23025 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.73□□□□□ -1.33
XPAP23025 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
XPAP23025 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
XPAP23025 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
XPAP23025 AC093278.2-201ENST00000564956 2485 ntBASIC6.73□□□□□ -1.33
XPAP23025 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.73□□□□□ -1.33
XPAP23025 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.73□□□□□ -1.33
XPAP23025 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.73□□□□□ -1.33
XPAP23025 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
XPAP23025 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
XPAP23025 AL022323.4-201ENST00000623980 13120 ntBASIC6.73□□□□□ -1.33
XPAP23025 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.73□□□□□ -1.33
XPAP23025 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
XPAP23025 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.73□□□□□ -1.33
XPAP23025 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
XPAP23025 SNORA70.3-201ENST00000365075 132 ntBASIC6.73□□□□□ -1.33
XPAP23025 MIR191-201ENST00000384873 92 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms