Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.23□□□□□ -1.09
RFX1P22670 MIR1273F-201ENST00000580581 99 ntBASIC8.23□□□□□ -1.09
RFX1P22670 MIR4801-201ENST00000582704 82 ntBASIC8.23□□□□□ -1.09
RFX1P22670 BUB1P1-201ENST00000603541 607 ntBASIC8.23□□□□□ -1.09
RFX1P22670 MIR7162-201ENST00000611134 69 ntBASIC8.23□□□□□ -1.09
RFX1P22670 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.23□□□□□ -1.09
RFX1P22670 PART1_3.1-201ENST00000619680 131 ntBASIC8.23□□□□□ -1.09
RFX1P22670 BX005040.2-201ENST00000620504 370 ntBASIC8.23□□□□□ -1.09
RFX1P22670 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 AC073488.8-201ENST00000631952 757 ntBASIC8.23□□□□□ -1.09
RFX1P22670 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RFX1P22670 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 NCLP2-201ENST00000416078 1462 ntBASIC8.23□□□□□ -1.09
RFX1P22670 OR7E11P-202ENST00000642027 1491 ntBASIC8.23□□□□□ -1.09
RFX1P22670 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.23□□□□□ -1.09
RFX1P22670 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC8.23□□□□□ -1.09
RFX1P22670 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.23□□□□□ -1.09
RFX1P22670 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RFX1P22670 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RFX1P22670 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RFX1P22670 MTCO1P6-201ENST00000481192 1384 ntBASIC8.22□□□□□ -1.09
RFX1P22670 CASC19-281ENST00000642118 1554 ntBASIC8.22□□□□□ -1.09
RFX1P22670 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 AC010329.1-201ENST00000593903 8328 ntBASIC8.22□□□□□ -1.09
RFX1P22670 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
RFX1P22670 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.22□□□□□ -1.09
RFX1P22670 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.22□□□□□ -1.09
RFX1P22670 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
RFX1P22670 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RFX1P22670 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.22□□□□□ -1.09
RFX1P22670 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RFX1P22670 RN7SKP236-201ENST00000410635 284 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AF274573.1-201ENST00000430535 494 ntBASIC8.22□□□□□ -1.09
RFX1P22670 USP9YP31-201ENST00000431405 881 ntBASIC8.22□□□□□ -1.09
RFX1P22670 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 TCEAL4P1-201ENST00000453620 588 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AL096803.1-201ENST00000456921 1021 ntBASIC8.22□□□□□ -1.09
RFX1P22670 RPS18P13-201ENST00000461260 454 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AL445187.1-201ENST00000502685 260 ntBASIC8.22□□□□□ -1.09
RFX1P22670 WBP1LP4-201ENST00000505043 344 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC131392.1-201ENST00000506490 633 ntBASIC8.22□□□□□ -1.09
RFX1P22670 MTATP6P22-201ENST00000507369 598 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC138866.2-201ENST00000508650 584 ntBASIC8.22□□□□□ -1.09
RFX1P22670 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 GUSBP9-201ENST00000510138 584 ntBASIC8.22□□□□□ -1.09
RFX1P22670 CR383658.1-201ENST00000514609 734 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC023632.1-201ENST00000518463 375 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.22□□□□□ -1.09
RFX1P22670 KCTD9P4-201ENST00000526766 1166 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AC027796.1-201ENST00000575593 512 ntBASIC8.22□□□□□ -1.09
RFX1P22670 MIR3137-201ENST00000577367 75 ntBASIC8.22□□□□□ -1.09
RFX1P22670 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.22□□□□□ -1.09
RFX1P22670 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.22□□□□□ -1.09
RFX1P22670 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 AL078624.2-201ENST00000605063 554 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC092354.2-201ENST00000607786 514 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC239868.4-201ENST00000608318 671 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AP000238.1-201ENST00000608759 426 ntBASIC8.22□□□□□ -1.09
RFX1P22670 AC027271.1-201ENST00000610270 610 ntBASIC8.22□□□□□ -1.09
RFX1P22670 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
RFX1P22670 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RFX1P22670 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.22□□□□□ -1.09
RFX1P22670 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 AC087359.1-201ENST00000508335 1740 ntBASIC8.22□□□□□ -1.09
RFX1P22670 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms